Gene
| Gene Model ID | pfu_aug2.0_182.1_07115 |
|---|---|
| Locus | scaffold182.1 : 143796 ... 144995 : + |
| To GenomeBrowser | scaffold182.1:143796..144995 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_3647.1_52057 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07115.t1 | 5 | 1 | EF-hand_6 | 15 | 41 | 2.8e-20 | 70.3 | 2.3e-08 | 3.9e-05 | 23.1 |
| pfu_aug2.0_182.1_07115.t1 | 4 | 1 | EF-hand_8 | 15 | 40 | 7.8e-10 | 38.2 | 0.00035 | 0.57 | 9.8 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 1 | EF-hand_1 | 16 | 40 | 7.9e-23 | 77.9 | 1.8e-07 | 0.0003 | 19.8 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 1 | EF-hand_10 | 16 | 40 | 1.0e-05 | 25.1 | 0.00021 | 0.35 | 10.5 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 1 | EF-hand_7 | 17 | 73 | 9.8e-22 | 76.8 | 8.8e-11 | 1.5e-07 | 31.4 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 1 | EF-hand_5 | 21 | 38 | 1.9e-11 | 42.7 | 5.9e-06 | 0.0098 | 15.2 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 2 | EF-hand_7 | 56 | 78 | 9.8e-22 | 76.8 | 4.4e-06 | 0.0072 | 16.4 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 2 | EF-hand_6 | 56 | 76 | 2.8e-20 | 70.3 | 1.2e-05 | 0.02 | 14.7 |
| pfu_aug2.0_182.1_07115.t1 | 4 | 2 | EF-hand_8 | 56 | 72 | 7.8e-10 | 38.2 | 0.0026 | 4.3 | 7.0 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 2 | EF-hand_1 | 57 | 76 | 7.9e-23 | 77.9 | 2.9e-07 | 0.00048 | 19.2 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 2 | EF-hand_5 | 57 | 71 | 1.9e-11 | 42.7 | 0.0011 | 1.8 | 8.0 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 3 | EF-hand_6 | 79 | 86 | 2.8e-20 | 70.3 | 2.0 | 3300.0 | -1.5 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 3 | EF-hand_1 | 80 | 86 | 7.9e-23 | 77.9 | 4.0 | 6500.0 | -3.1 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 3 | EF-hand_5 | 80 | 86 | 1.9e-11 | 42.7 | 0.79 | 1300.0 | -1.0 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 2 | EF-hand_10 | 93 | 117 | 1.0e-05 | 25.1 | 6.1e-05 | 0.1 | 12.3 |
| pfu_aug2.0_182.1_07115.t1 | 4 | 3 | EF-hand_8 | 96 | 121 | 7.8e-10 | 38.2 | 0.00037 | 0.6 | 9.7 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 3 | EF-hand_7 | 97 | 152 | 9.8e-22 | 76.8 | 2.9e-16 | 4.7e-13 | 49.0 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 4 | EF-hand_1 | 98 | 119 | 7.9e-23 | 77.9 | 1.9e-08 | 3.1e-05 | 22.9 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 4 | EF-hand_6 | 98 | 123 | 2.8e-20 | 70.3 | 1.7e-07 | 0.00028 | 20.5 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 4 | EF-hand_5 | 98 | 119 | 1.9e-11 | 42.7 | 6.4e-05 | 0.11 | 11.9 |
| pfu_aug2.0_182.1_07115.t1 | 4 | 4 | EF-hand_8 | 109 | 150 | 7.8e-10 | 38.2 | 3.2e-08 | 5.3e-05 | 22.7 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 5 | EF-hand_1 | 129 | 154 | 7.9e-23 | 77.9 | 9.0e-08 | 0.00015 | 20.8 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 5 | EF-hand_6 | 129 | 154 | 2.8e-20 | 70.3 | 5.1e-06 | 0.0084 | 15.9 |
| pfu_aug2.0_182.1_07115.t1 | 5 | 5 | EF-hand_5 | 130 | 149 | 1.9e-11 | 42.7 | 8.7e-05 | 0.14 | 11.5 |
| pfu_aug2.0_182.1_07115.t1 | 3 | 3 | EF-hand_10 | 147 | 154 | 1.0e-05 | 25.1 | 2.6 | 4300.0 | -2.6 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07115.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07115.t1 atggcatcaagcttctttgacccaaaggcaccagatgttgctctgagaagtttatacatgaaatatgataaagatggtag cgggtctctggacaagaatgaattgaccacattcttcagggacgatttaggactgacagacgatcaaacagaaacgtaca atttactgcttgataaagatggtgatgcaaaaatatcgtatgacgaacttgtttcatggttaaagagtggggaaagattc aagaatatcgacgacaattcacgttatcataggcttcaacatgctgtaacaatgttccagaaatatgataaagacggaaa tagctcgcttgatagggacgaattccggaatttacttcttgaccttggagaaaaacctgagagattagattccgctttag cagcaatggacacagatggcaatggcgtcattgctttccaagaattcttgaaatggctgaattggataccattagacgaa ttttga |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07115.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07115.t1 MASSFFDPKAPDVALRSLYMKYDKDGSGSLDKNELTTFFRDDLGLTDDQTETYNLLLDKDGDAKISYDELVSWLKSGERF KNIDDNSRYHRLQHAVTMFQKYDKDGNSSLDRDEFRNLLLDLGEKPERLDSALAAMDTDGNGVIAFQEFLKWLNWIPLDE F |
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