Gene
| Gene Model ID | pfu_aug2.0_182.1_07114 |
|---|---|
| Locus | scaffold182.1 : 139756 ... 141932 : + |
| To GenomeBrowser | scaffold182.1:139756..141932 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_50647.1_70702 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07114.t1 | 4 | 1 | EF-hand_1 | 17 | 42 | 4.9e-24 | 81.7 | 1.8e-07 | 0.0003 | 19.8 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 1 | EF-hand_6 | 17 | 43 | 2.1e-21 | 73.8 | 6.0e-08 | 9.8e-05 | 21.9 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 1 | EF-hand_8 | 17 | 43 | 2.1e-13 | 49.6 | 0.00028 | 0.47 | 10.1 |
| pfu_aug2.0_182.1_07114.t1 | 2 | 1 | EF-hand_7 | 20 | 75 | 8.2e-22 | 77.1 | 7.3e-12 | 1.2e-08 | 34.9 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 1 | EF-hand_5 | 23 | 40 | 2.5e-13 | 48.7 | 6.5e-06 | 0.011 | 15.0 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 2 | EF-hand_8 | 45 | 74 | 2.1e-13 | 49.6 | 0.00046 | 0.76 | 9.4 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 2 | EF-hand_1 | 58 | 78 | 4.9e-24 | 81.7 | 1.4e-07 | 0.00022 | 20.2 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 2 | EF-hand_6 | 58 | 78 | 2.1e-21 | 73.8 | 4.8e-06 | 0.0078 | 16.0 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 2 | EF-hand_5 | 59 | 73 | 2.5e-13 | 48.7 | 0.00019 | 0.32 | 10.4 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 3 | EF-hand_8 | 95 | 122 | 2.1e-13 | 49.6 | 9.7e-07 | 0.0016 | 18.0 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 3 | EF-hand_5 | 99 | 120 | 2.5e-13 | 48.7 | 7.9e-07 | 0.0013 | 17.9 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 3 | EF-hand_1 | 99 | 121 | 4.9e-24 | 81.7 | 8.8e-09 | 1.5e-05 | 23.9 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 3 | EF-hand_6 | 99 | 122 | 2.1e-21 | 73.8 | 6.3e-08 | 0.0001 | 21.8 |
| pfu_aug2.0_182.1_07114.t1 | 2 | 2 | EF-hand_7 | 100 | 154 | 8.2e-22 | 77.1 | 4.8e-15 | 7.8e-12 | 45.1 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 4 | EF-hand_8 | 127 | 152 | 2.1e-13 | 49.6 | 7.0e-06 | 0.012 | 15.2 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 4 | EF-hand_1 | 131 | 156 | 4.9e-24 | 81.7 | 7.9e-08 | 0.00013 | 21.0 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 4 | EF-hand_6 | 131 | 156 | 2.1e-21 | 73.8 | 4.4e-06 | 0.0073 | 16.1 |
| pfu_aug2.0_182.1_07114.t1 | 4 | 4 | EF-hand_5 | 132 | 151 | 2.5e-13 | 48.7 | 0.00018 | 0.29 | 10.5 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07114.t1 atggctcgggcaaccagtttctttgacccaaatgcaccggatgttgttctgagaagcttatatatgaaatacgacaaaga tggcagcggttctctggacaagaacgaactgagcagtctcttcaaggacgatcttggactgacggacagccaagtagaag cgtactgtctactacttgataaagacggtgatgcaaaaatatcgtttgacgaacttgtttcatggttgaagagtggagaa agattcgagaatcttaaagataagtcccgttataacagacttcaaaaagctgttgcaatgttcaagaaatatgataaaga cggtaataattccttggaccgaaatgaattcaagaatttatttctcgatgttggcgggaaacccgagaaattcgatgccg ctttagcccaaatggatagagatggcaatggcgtcattgccttccaagaatttttgaaatggctgaattggatacctttg gacgatatttga |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07114.t1 MARATSFFDPNAPDVVLRSLYMKYDKDGSGSLDKNELSSLFKDDLGLTDSQVEAYCLLLDKDGDAKISFDELVSWLKSGE RFENLKDKSRYNRLQKAVAMFKKYDKDGNNSLDRNEFKNLFLDVGGKPEKFDAALAQMDRDGNGVIAFQEFLKWLNWIPL DDI |
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