Gene
| Gene Model ID | pfu_aug2.0_182.1_07108 |
|---|---|
| Locus | scaffold182.1 : 77336 ... 78091 : + |
| To GenomeBrowser | scaffold182.1:77336..78091 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_50647.1_70702 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07108.t1 | 4 | 1 | EF-hand_1 | 17 | 42 | 1.4e-25 | 86.5 | 1.3e-07 | 0.00017 | 20.6 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 1 | EF-hand_6 | 17 | 43 | 1.4e-22 | 77.4 | 7.8e-08 | 9.6e-05 | 21.9 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 1 | EF-hand_8 | 18 | 43 | 2.6e-12 | 46.1 | 0.00014 | 0.17 | 11.4 |
| pfu_aug2.0_182.1_07108.t1 | 2 | 1 | EF-hand_7 | 20 | 75 | 3.1e-20 | 72.0 | 2.2e-11 | 2.7e-08 | 33.8 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 1 | EF-hand_5 | 23 | 40 | 7.0e-13 | 47.2 | 1.4e-05 | 0.018 | 14.3 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 2 | EF-hand_8 | 29 | 74 | 2.6e-12 | 46.1 | 1.2e-07 | 0.00015 | 21.3 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 2 | EF-hand_6 | 54 | 78 | 1.4e-22 | 77.4 | 2.4e-06 | 0.003 | 17.3 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 2 | EF-hand_1 | 58 | 78 | 1.4e-25 | 86.5 | 1.9e-07 | 0.00023 | 20.2 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 2 | EF-hand_5 | 59 | 73 | 7.0e-13 | 47.2 | 0.00026 | 0.32 | 10.4 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 3 | EF-hand_1 | 99 | 121 | 1.4e-25 | 86.5 | 1.5e-08 | 1.8e-05 | 23.6 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 3 | EF-hand_6 | 99 | 121 | 1.4e-22 | 77.4 | 1.4e-07 | 0.00018 | 21.1 |
| pfu_aug2.0_182.1_07108.t1 | 2 | 2 | EF-hand_7 | 99 | 154 | 3.1e-20 | 72.0 | 6.8e-14 | 8.4e-11 | 41.8 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 3 | EF-hand_5 | 99 | 120 | 7.0e-13 | 47.2 | 1.5e-05 | 0.019 | 14.3 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 3 | EF-hand_8 | 99 | 121 | 2.6e-12 | 46.1 | 9.5e-05 | 0.12 | 12.0 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 4 | EF-hand_8 | 128 | 152 | 2.6e-12 | 46.1 | 2.4e-05 | 0.03 | 13.9 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 4 | EF-hand_1 | 131 | 156 | 1.4e-25 | 86.5 | 4.1e-09 | 5.0e-06 | 25.4 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 4 | EF-hand_6 | 131 | 156 | 1.4e-22 | 77.4 | 2.0e-07 | 0.00025 | 20.6 |
| pfu_aug2.0_182.1_07108.t1 | 4 | 4 | EF-hand_5 | 131 | 151 | 7.0e-13 | 47.2 | 5.0e-05 | 0.061 | 12.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07108.t1 | gi|156404173|ref|XP_001640282.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_182.1_07108.t1 | gi|449686995|ref|XP_002167840.2| | PREDICTED: uncharacterized calcium-binding protein B0563.7-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_182.1_07108.t1 | gi|221103437|ref|XP_002169369.1| | PREDICTED: calcium-dependent protein kinase 19-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_182.1_07108.t1 | gi|156405146|ref|XP_001640593.1| | predicted protein [Nematostella vectensis] | 9.99967e-42 |
| pfu_aug2.0_182.1_07108.t1 | gi|449685868|ref|XP_004211000.1| | 5.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07108.t1 atggcaaaaccaaagagtttcttcaaccctaatgcaccggatatagttttgagaagtttatacatgaagtacgacataga cggcaacgggaaattggacagaaacgaacttaccagtctcttgaaggacgatcttggactgacggacagccaagtagaag cgtactatctactacttgataaagacggtgatgcaaaaatatcgtttgacgaacttgtttcatggttgaagagtggagaa agattcaagaatatccaagataagacacgttatcacaggcttcaaaaagctgtcaaaatgttcaagaaatacgacactga cggtagtcatagcttggatcgcgaagaattcaaaaagttattttgtgactgcggcggaaaagcaaagaaattagatgctg cttttgcttcaatggacgaagacggtaatggtaaaatagcattccaagaatttctgaaatggctgaactggataccaatg gaagaattttga |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07108.t1 MAKPKSFFNPNAPDIVLRSLYMKYDIDGNGKLDRNELTSLLKDDLGLTDSQVEAYYLLLDKDGDAKISFDELVSWLKSGE RFKNIQDKTRYHRLQKAVKMFKKYDTDGSHSLDREEFKKLFCDCGGKAKKLDAAFASMDEDGNGKIAFQEFLKWLNWIPM EEF |
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