Gene
| Gene Model ID | pfu_aug2.0_182.1_07106 |
|---|---|
| Locus | scaffold182.1 : 51441 ... 61115 : - |
| To GenomeBrowser | scaffold182.1:51441..61115 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_2839.1_15960 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calponin transgelin | GO:0005515 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07106.t1 | 1 | 1 | CH | 24 | 129 | 1.3e-12 | 47.7 | 3.6e-16 | 1.8e-12 | 47.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07106.t1 | gi|676480181|ref|XP_009061981.1| | hypothetical protein LOTGIDRAFT_210431 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_182.1_07106.t1 | gi|684377348|ref|XP_009165689.1| | hypothetical protein T265_03036 [Opisthorchis viverrini] | 0.0 |
| pfu_aug2.0_182.1_07106.t1 | gi|157118472|ref|XP_001659123.1| | AAEL008303-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_182.1_07106.t1 | gi|557775282|ref|XP_005187287.1| | PREDICTED: myophilin [Musca domestica] | 0.0 |
| pfu_aug2.0_182.1_07106.t1 | gi|499011094|ref|XP_004536966.1| | PREDICTED: myophilin [Ceratitis capitata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07106.t1 atgcagaatgggagagctcgagagaagagtggaaatgggaatctgatgggcaaaagggacaaggagctcgagaatcaagc tctagaatggatagccgaaaatctgaaaggcacgggaaatgatacattcgaccagaaaggggctatagaagacatactga aggatggaatagtgctttgcaatcttatgaataaactcatgcctggttgcattaagaaaattgacaaaaaaggaggaggc ttcgctctaatgcaaaacatcgaacgattccaagaagcagccaagaaatacggcgtacctgttaacgaagttttccagac cgtcgacctttgggaaagaaaaaatataccccaggttacgctatgtattcatgcgctaggacgtgtggcgcaaaccagag atgactacacaggaccaatgctcggcccaaaaatggccgagaagcagacccgggactttaccgaggatcagctacgagag ggtagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntta tcagcttacagtacggaagtaacaagggcgcaagtcaagccggaattaacatgggaaaacaaagaatgatcaacgattag |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07106.t1 MQNGRAREKSGNGNLMGKRDKELENQALEWIAENLKGTGNDTFDQKGAIEDILKDGIVLCNLMNKLMPGCIKKIDKKGGG FALMQNIERFQEAAKKYGVPVNEVFQTVDLWERKNIPQVTLCIHALGRVAQTRDDYTGPMLGPKMAEKQTRDFTEDQLRE GRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISLQYGSNKGASQAGINMGKQRMIND |
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