Gene
| Gene Model ID | pfu_aug2.0_182.1_07105 |
|---|---|
| Locus | scaffold182.1 : 33389 ... 50475 : - |
| To GenomeBrowser | scaffold182.1:33389..50475 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_2839.1_15961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07105.t1 | 2 | 1 | Popeye | 122 | 216 | 0.0 | 158.1 | 1.5e-25 | 4.5e-22 | 78.4 |
| pfu_aug2.0_182.1_07105.t1 | 2 | 2 | Popeye | 323 | 416 | 0.0 | 158.1 | 3.0e-25 | 9.0e-22 | 77.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07105.t1 | gi|524866476|ref|XP_005090059.1| | PREDICTED: blood vessel epicardial substance-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_182.1_07105.t1 | gi|241826633|ref|XP_002414704.1| | Popeye domain-containing protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_182.1_07105.t1 | gi|755946876|ref|XP_011300282.1| | PREDICTED: popeye domain-containing protein 3 isoform X2 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_182.1_07105.t1 | gi|755946874|ref|XP_011300281.1| | PREDICTED: popeye domain-containing protein 3 isoform X1 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_182.1_07105.t1 | gi|749785753|ref|XP_011146564.1| | PREDICTED: popeye domain-containing protein 3-like [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07105.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07105.t1 atgcttttgagtgatccagaaactgacaaagtgacgcgacttcctgtctggaataaaacggataacattgaaccaaatgt aacgaagacagtgattggttgtccattgtgggagtcgccacatcacttcctgttccaagtcgctaatggcgtcctcctga ttgcgctattttcgtccagcggacgccatggagtgcttttcatgcacacaacttttgtgttagggttccttttgttgtct gtttggtcatgggtgatactttgtgccccagattatttttcctggaatttcagttttatgattgttaatgctgtccaggc tttgtttttgatgtataagatcagacctgtcaaattctgcgacgatttggaagatgtatacatcaacctatttcagcctg tacaagtatcaagacagctatttaagaagttggtatcccctgatttctgcacgttagctacattgaatgatggagaatct tacgccagtcagggcatcagtaagactgatagattaggactgcttatatctggaaggatgagtgtctacaatcataacag ctctttacatcatataaaagaaaacgaattcatagactctccagagtttgagtctggtatgacaggggaagaaaaatacc agatagcttcatcaaagggatcgcacgtagatatcagactacctagcctctcaagtattgtctctaccaagttagatgtc agaaaaactgtcgctcatatccttgatgacgaggccgcttacaaccatgtcacttccggtattgatgacgtatttacaga tttgacggaagcagaaataaatgaaggtttccttttgttgtctgtttggtcatgggtgatactttgtgccccggattact tttcctggaattttagttttatgattgttaatgctgtccaggctttgtttttgatgtataagatcagacctgtcaaattc tgtgacgatttggaagatgtatacattaacctatttcagcctgtacaagtatcaagacagttattcaagaagttggtatc tcctgatttctgtacgttagctacattgaatgatggggaatcttacgccagtcagggaatcagtaagactgatagactag gactccttatatctggaaggatgagtgtctacaatcataacagctctttacatcatataaaagaaaacgaattcatagac tctccagagtttgagtctggcatgacaggggaggaaaaataccagattgaggatcactga |
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Protein
| Protein ID | pfu_aug2.0_182.1_07105.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07105.t1 MLLSDPETDKVTRLPVWNKTDNIEPNVTKTVIGCPLWESPHHFLFQVANGVLLIALFSSSGRHGVLFMHTTFVLGFLLLS VWSWVILCAPDYFSWNFSFMIVNAVQALFLMYKIRPVKFCDDLEDVYINLFQPVQVSRQLFKKLVSPDFCTLATLNDGES YASQGISKTDRLGLLISGRMSVYNHNSSLHHIKENEFIDSPEFESGMTGEEKYQIASSKGSHVDIRLPSLSSIVSTKLDV RKTVAHILDDEAAYNHVTSGIDDVFTDLTEAEINEGFLLLSVWSWVILCAPDYFSWNFSFMIVNAVQALFLMYKIRPVKF CDDLEDVYINLFQPVQVSRQLFKKLVSPDFCTLATLNDGESYASQGISKTDRLGLLISGRMSVYNHNSSLHHIKENEFID SPEFESGMTGEEKYQIEDH |
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