Gene
| Gene Model ID | pfu_aug2.0_1815.1_18552 |
|---|---|
| Locus | scaffold1815.1 : 88346 ... 107920 : + |
| To GenomeBrowser | scaffold1815.1:88346..107920 |
| Genes list of scaffold | scaffold1815.1 |
| Synonym | pfu_aug1.0_13310.1_39475 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1815.1_18552.t1 | 2 | 1 | I-set | 167 | 184 | 1.1e-12 | 47.6 | 1.4 | 3400.0 | -2.1 |
| pfu_aug2.0_1815.1_18552.t1 | 2 | 1 | Ig_2 | 183 | 204 | 7.4e-08 | 32.4 | 0.14 | 350.0 | 1.4 |
| pfu_aug2.0_1815.1_18552.t1 | 2 | 1 | ig | 193 | 212 | 5.8e-07 | 29.5 | 1.1 | 2600.0 | -1.4 |
| pfu_aug2.0_1815.1_18552.t1 | 2 | 2 | I-set | 304 | 386 | 1.1e-12 | 47.6 | 8.6e-16 | 2.1e-12 | 46.6 |
| pfu_aug2.0_1815.1_18552.t1 | 2 | 2 | Ig_2 | 306 | 387 | 7.4e-08 | 32.4 | 1.3e-10 | 3.2e-07 | 30.3 |
| pfu_aug2.0_1815.1_18552.t1 | 2 | 2 | ig | 310 | 373 | 5.8e-07 | 29.5 | 9.6e-10 | 2.4e-06 | 27.5 |
Transcript
| Transcript ID | pfu_aug2.0_1815.1_18552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1815.1_18552.t1 atgggagtgagtgtccaggaagagtcggcatctcctacttgcatgcaacacccgtcgcttcaattcgctagaattgtcgc atccggttactttcattttggaagatataaagcatgtagtgacctgtgtcgtgccttgtccttcatctttgactacattt atggggtttctagtaacagtcccaacttcattccgttcaaagcacagcttcaatatgcctctgttgcccaacagaacaat ggaatggtccaatacgtcataaaagttctggacgcagacgacacggaatgcatcttcatggcagaccacattcacgacga cgctttggtaaatgatgtaatgaccaaaggagaggttattacagggatttcattactgcagagaacaccatcttggctaa tgttcacttgtgcttctctaaccttccccgtggtagcacagtacttattcaacacagacatgccggctaacgttacaacg cagatcgaactaagaaatacatacaggtgcaaaataagtgagccagttttctcatccaaagagaacatgtgtattgttga ggttcaagcgacatgtagctttgagctaacgagaaacaattccttcttacagcttgaaggcacttttcttacggaaggta atatatcccatttattaagcgaagacaattacaacacaacacgaacttacgaaaatggagttgcaaaggcaatttttgtt tcctcaaaccttgttccaccgaacagcatatttgtcccgtggttttccctagctttaagtggaatgggagacgagaaacc aattatcttacaaaaacattcattcctctcgcccaaggcttttgatgggtcgagtgaaattatccccgagggtcgtgttg ccattgcaatttatcctccgtacatggacaccatttatgtcaaaagaggatcaactgcaaatatagcatgtggagcgtat ggaaaccctgatcctgtagtaacatggagcacgaatggacaggaacttgagggaaaaaacgaacttacaaatgtaaagtg ggataaataccatcaatatcagtccctcataattgaagacatggacactgttaatgacggagaatatgtatgccaagctc aggtccttggcaacgtcatgacgaaatcggtaaacatcaaaacatgcgacccagcatctgtccatttatcaacgactaag gatgacaattttaatagataa |
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Protein
| Protein ID | pfu_aug2.0_1815.1_18552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1815.1_18552.t1 MGVSVQEESASPTCMQHPSLQFARIVASGYFHFGRYKACSDLCRALSFIFDYIYGVSSNSPNFIPFKAQLQYASVAQQNN GMVQYVIKVLDADDTECIFMADHIHDDALVNDVMTKGEVITGISLLQRTPSWLMFTCASLTFPVVAQYLFNTDMPANVTT QIELRNTYRCKISEPVFSSKENMCIVEVQATCSFELTRNNSFLQLEGTFLTEGNISHLLSEDNYNTTRTYENGVAKAIFV SSNLVPPNSIFVPWFSLALSGMGDEKPIILQKHSFLSPKAFDGSSEIIPEGRVAIAIYPPYMDTIYVKRGSTANIACGAY GNPDPVVTWSTNGQELEGKNELTNVKWDKYHQYQSLIIEDMDTVNDGEYVCQAQVLGNVMTKSVNIKTCDPASVHLSTTK DDNFNR |
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