Gene
| Gene Model ID | pfu_aug2.0_1815.1_18547 |
|---|---|
| Locus | scaffold1815.1 : 15042 ... 17805 : - |
| To GenomeBrowser | scaffold1815.1:15042..17805 |
| Genes list of scaffold | scaffold1815.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1815.1_18547.t1 | 1 | 1 | Lectin_C | 3 | 105 | 3.1e-08 | 34.2 | 2.5e-12 | 3.6e-08 | 33.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1815.1_18547.t1 | gi|260816902|ref|XP_002603326.1| | hypothetical protein BRAFLDRAFT_208012 [Branchiostoma floridae] | 7.0e-07 |
| pfu_aug2.0_1815.1_18547.t1 | gi|736202845|ref|XP_010774977.1| | PREDICTED: C-type lectin domain family 11 member A [Notothenia coriiceps] | 1.0e-06 |
| pfu_aug2.0_1815.1_18547.t1 | gi|602632520|ref|XP_007423150.1| | PREDICTED: C-type lectin domain family 11 member A [Python bivittatus] | 1.0e-06 |
| pfu_aug2.0_1815.1_18547.t1 | gi|327276000|ref|XP_003222759.1| | PREDICTED: C-type lectin domain family 11 member A [Anolis carolinensis] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1815.1_18547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1815.1_18547.t1 atgatgcaagaagtatgtcaaaacgaaggcggacaactcttgaaaataatgaatgacgtggaaagattagacattgcgaa ctttttgcaaaatcatcctacatctagccctttaaagcacgtgatgtttcaagggacagagcagagaccatccgggattt ggtacttcgatgatggttctgagatttcgtatctcccctgggcaacggaccctcagcaacctaacaccgacacacataac tgtttgtatcttaaatcaccgtacttattctggtgggacggcgcatgtgaagcaaatgcagcattcatttgtcaaatata a |
|
Protein
| Protein ID | pfu_aug2.0_1815.1_18547.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1815.1_18547.t1 MMQEVCQNEGGQLLKIMNDVERLDIANFLQNHPTSSPLKHVMFQGTEQRPSGIWYFDDGSEISYLPWATDPQQPNTDTHN CLYLKSPYLFWWDGACEANAAFICQI |
|