Gene
| Gene Model ID | pfu_aug2.0_1763.1_11850 |
|---|---|
| Locus | scaffold1763.1 : 110188 ... 116305 : - |
| To GenomeBrowser | scaffold1763.1:110188..116305 |
| Genes list of scaffold | scaffold1763.1 |
| Synonym | pfu_aug1.0_12603.1_17880 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1763.1_11850.t1 | 5 | 1 | zf-C2H2 | 6 | 29 | 1.2e-08 | 34.8 | 9.7e-09 | 2.1e-05 | 24.6 |
| pfu_aug2.0_1763.1_11850.t1 | 5 | 2 | zf-C2H2 | 35 | 56 | 1.2e-08 | 34.8 | 6.5e-07 | 0.0014 | 18.8 |
| pfu_aug2.0_1763.1_11850.t1 | 5 | 3 | zf-C2H2 | 140 | 146 | 1.2e-08 | 34.8 | 7.0 | 15000.0 | -3.9 |
| pfu_aug2.0_1763.1_11850.t1 | 5 | 4 | zf-C2H2 | 366 | 385 | 1.2e-08 | 34.8 | 0.003 | 6.3 | 7.3 |
| pfu_aug2.0_1763.1_11850.t1 | 5 | 5 | zf-C2H2 | 519 | 524 | 1.2e-08 | 34.8 | 1.8 | 3900.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1763.1_11850.t1 | gi|645040646|ref|XP_008210807.1| | PREDICTED: uncharacterized protein LOC100117040 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_1763.1_11850.t1 | gi|268535494|ref|XP_002632880.1| | Hypothetical protein CBG15088 [Caenorhabditis briggsae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1763.1_11850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1763.1_11850.t1 atggcacctgctagatttgaatgcacgctttgcggtaaatctttcaccagacgctttgctttagatcgccatattcggac gatccatggtggagagtcctcaaaatgtggattttgcggacaagatttcaaccgaaaagacaattatcttcggcatttaa aatcccatgatcaacagggtggaggacctgtagaggaagtgaatgacaacaaaacaaacagaactgtcgacgataagaaa ttacaagcagacgattcttcctcagaaaacgataaggtggattgttttacagaggaggaggcaatcaatggtaatttgag aaagtactctatagaaggaaagggtaagttcatctttgaccctttatcctatttaaaatcaaaagaagatgaaataagat ccattctgaagaaggaagtcttaagaaaacacatcaaatattatctcacgatgcaagtgagatttaaaaagcagaaggga gatgtcatcgaaacaacggagccttattttcacggacgatgtcacatcctgctgaaaccggaagacatagagcaatcatt aagggaaagcatcatgaaaatgatcaattcctttattgaataccagcgtgagggaagcagttggacacttgacaaagtga tgaatgtcaacattcacatcgctacctatattccgatcaaaggctccagttacctaccacttccggcaaaattggcaaag aaaaaggccattgtcaatgtgcagaataccgaagatagatgtttcatgtggtccgtattagctgcagtccagccagtcaa tattcatccggaacggatcatcaattatgtggaacacctcgatgcattggactttatgggaatctctttttcagtaaaag tagccgacattcccaagttcgagaagcggaatgacatctctatcaacgtttttgggtacgagagggatgtactttttccc cttcaccttaccaaagagcgaggtgtacgtcacgtaaacattctcgtcatcgacaagggagaaaaatcacactactgctg gataaagaacttctatcgacttcttggtgatcaaaatgaagataacaatcaatatcattattgtcactattgcctccatg gatttaccaagaaaagactcttgaagaaacacataccctactgccaggtgcatggtgcacagcgcacagagatgccctcc gaagagaacaaatggctacaattcaaagaagtcaaaaaacagctcaaagtaccttatgttttgtatgccgatttcgagag cattctagaacaacgatatggatgtcagcctgacccctctaaggcctccacgataaaacttgccagacacattccctccg gcttcacttacaaggtagtgggcctcaaccaggaattgacggaagatcacgtgacttacagaggtcccgatacaatcaag gtattcatggatcatatggtcaatctcgaagagagactaaccaaagtgttgaacaatccaaaacctttacacatgaccga tgatgaccacagagcgttcagcgaggcaactcattgtcatatatgtgacgagctactaaatcatgatagagtccgtgatc attgtcacattacgggcaaggtccgtggtgctgcccataatgactattttttagacacattccaattcatgtccacatcc ttacaaaaactggtagaaaacctggcgaaaaagggtatttcgaaattctcccatttaaagtcctacgtggaggccactca tccggaaaacccaaacataaaactgcaattattgacgcgcaaaggtgtttatccttatagatacatggactcctttgaac gatttaatgaggcatctctccccgacaaaagtgccttttataatgatttggagggcaaggacatcccggaggcagaatat aaacacgcagaaaaggtctgggatatttttaaaacgaaaaatttgggggaatatcacgacctgtacatggagtctgatgt gcatcttttagccgacatatttgaaaatttccgtgatttatgtttagaaatatacggtctcgatgcagcacatttttata cggctgcagggctagcttggcaggcggccctcaaaatgaccggcgtccaactggagctattgaccgacccggacatgcat ttgtttatcgaaaagggattgaggggttgtatagccatgatctcaaagcgttatgcaaaagctaacaacccccacctttc cgattattacccaaagaaagagtcaaattatctcttgtacctggatgccaacaatttatatggatgggggatgagtcaat ttctaccaacacatggctttgaatgggtcgacccacatagagtcgatgtcacgtctatcccggaagagggagacaccggg tatattttggaagtagatttggaataccctagggaacttcacgacagtcacagtgattatcctctagctccggagtcttt ccaaatcaaaccggaaatgccctctaaatatcaagcagacctattagagaaacttggtatgaaaccgggatccgctacca aattaggtcccaaccttcacgacaaaaagaactatgtcgtccattatagaaacctacaattatacctatcactcggaatc gtcttcggcaaaacgatgcaaaatctcagaaaaagagtaaacattcaactcgtacatcgcgaaaagcagttggtgaagct gacggccaaaccaggtttcaagtcattcaaaattttcaataaagatctagcctcggtccagctcgtaaaaccaaaactcg ttttaaacagacctatttacgtcggtttcgccatcttagaattgtcaaaggttctgatgtatgattttcactataacttc gtaaagaccagatacggctctcgggcgcaactctgtttcacggataccgactccctttgttatgacatacgtacagagga cgtgtatgccgatatgcaagaaaacaaatatcttttcgattttagcgaataccccaaagatcactccctttacgatacaa ccaacgaaatggtcatcggaaaaatgaaagacgagtgtaaaggaaatgtcatgagagagtttgtaggtttgaaacctaaa atgtacagttttgcctacgagaagaaaatcgatgatgatgtttatcaatgcgaggaaataaaaaaggcaaagggtgtaag caaatctgtcgtggagtacagtataaatcatgacaattttagaggttgtcttttaagtcaggaatatcaaatggagtcca tggtgtcatttcgatcttataatcatcagatttacactatccgattgaacaaaacaagccttaatccctttgacgataaa cgatttatcttaaatgatggacaaaacactctagaccatggtcattggcgtattgcttga |
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Protein
| Protein ID | pfu_aug2.0_1763.1_11850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1763.1_11850.t1 MAPARFECTLCGKSFTRRFALDRHIRTIHGGESSKCGFCGQDFNRKDNYLRHLKSHDQQGGGPVEEVNDNKTNRTVDDKK LQADDSSSENDKVDCFTEEEAINGNLRKYSIEGKGKFIFDPLSYLKSKEDEIRSILKKEVLRKHIKYYLTMQVRFKKQKG DVIETTEPYFHGRCHILLKPEDIEQSLRESIMKMINSFIEYQREGSSWTLDKVMNVNIHIATYIPIKGSSYLPLPAKLAK KKAIVNVQNTEDRCFMWSVLAAVQPVNIHPERIINYVEHLDALDFMGISFSVKVADIPKFEKRNDISINVFGYERDVLFP LHLTKERGVRHVNILVIDKGEKSHYCWIKNFYRLLGDQNEDNNQYHYCHYCLHGFTKKRLLKKHIPYCQVHGAQRTEMPS EENKWLQFKEVKKQLKVPYVLYADFESILEQRYGCQPDPSKASTIKLARHIPSGFTYKVVGLNQELTEDHVTYRGPDTIK VFMDHMVNLEERLTKVLNNPKPLHMTDDDHRAFSEATHCHICDELLNHDRVRDHCHITGKVRGAAHNDYFLDTFQFMSTS LQKLVENLAKKGISKFSHLKSYVEATHPENPNIKLQLLTRKGVYPYRYMDSFERFNEASLPDKSAFYNDLEGKDIPEAEY KHAEKVWDIFKTKNLGEYHDLYMESDVHLLADIFENFRDLCLEIYGLDAAHFYTAAGLAWQAALKMTGVQLELLTDPDMH LFIEKGLRGCIAMISKRYAKANNPHLSDYYPKKESNYLLYLDANNLYGWGMSQFLPTHGFEWVDPHRVDVTSIPEEGDTG YILEVDLEYPRELHDSHSDYPLAPESFQIKPEMPSKYQADLLEKLGMKPGSATKLGPNLHDKKNYVVHYRNLQLYLSLGI VFGKTMQNLRKRVNIQLVHREKQLVKLTAKPGFKSFKIFNKDLASVQLVKPKLVLNRPIYVGFAILELSKVLMYDFHYNF VKTRYGSRAQLCFTDTDSLCYDIRTEDVYADMQENKYLFDFSEYPKDHSLYDTTNEMVIGKMKDECKGNVMREFVGLKPK MYSFAYEKKIDDDVYQCEEIKKAKGVSKSVVEYSINHDNFRGCLLSQEYQMESMVSFRSYNHQIYTIRLNKTSLNPFDDK RFILNDGQNTLDHGHWRIA |
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