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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1763.1_11848
Locus scaffold1763.1 : 106867 ... 108125 : -
To GenomeBrowser scaffold1763.1:106867..108125
Genes list of scaffold scaffold1763.1
Synonym pfu_aug1.0_11099.1_10259

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1763.1_11848.t1 1 1 rve 92 196 7.8e-17 61.4 1.8e-20 1.4e-16 60.7

Transcript
Transcript IDpfu_aug2.0_1763.1_11848.t1
Definition-
>pfu_aug2.0_1763.1_11848.t1
atgtttcattttacattgaacaacggcagacccatgtcgtgggaagactatctaaaggaaatttactacaatccgatcaa
cgcaggaagtttctccggaccggataaactatatcgctatgtcaagaaggcggggaaatacgtcatcagcaaataccgga
tccggaaatggttacaacgacaggaaccgtatagcttacagagaccccttgtgagaaagttcaagagaaacacggtaatc
accttgggtatcgatgatcaatgggatgccgacctaatggatatgaccaagtttgcgaaagagaacgatggatatgccta
catcctcgtagtcattgatattttttcaaaatatctatggctaagacccacgctggataaacgaggagaaagtatcacga
ctgcctttcaagcgatttttggagaagggagacaaccgagcagaatccgtacagataaaggccaagaattcaaatctagg
acatttaatgccctcctaaaaagaaacaatatcgagcatttatatgcacagaatacagaaataaaagctaactatgcaga
acgagtcatcaagacggtcaaagccaaaatatatcgatacatgacgtataagcaatcgcagcgctatgtagatcgcttgg
aagacttcaacaccaactataactctacgtttcatcgtacgattggtatggctcccgacaaagtcaatgaatccaaagaa
acaaatctttggtggaaaatgtactggcccaaaaagcctttggttgcaaggaaactgaaacaaactagaaaaccctttaa
attcaatgttggcgatcgagtgagggtgactcatatacggaatccttttacccgggaatatgatcaaaagtggtctggag
aactattcatcattgccgatagacgagtaagaggcggaatccccgtttacaaactcaaagactatttggaggaagatatt
attggcaccttttatcaacctgaacttcagaaagtggatatcagagaagatgatgtgttcaaaatagagacaatcctcaa
gacgaaaggacgcggaagatctcgtgaaatggctttattggccttccaaatttaa

Protein
Protein IDpfu_aug2.0_1763.1_11848.t1
Definition-
>pfu_aug2.0_1763.1_11848.t1
MFHFTLNNGRPMSWEDYLKEIYYNPINAGSFSGPDKLYRYVKKAGKYVISKYRIRKWLQRQEPYSLQRPLVRKFKRNTVI
TLGIDDQWDADLMDMTKFAKENDGYAYILVVIDIFSKYLWLRPTLDKRGESITTAFQAIFGEGRQPSRIRTDKGQEFKSR
TFNALLKRNNIEHLYAQNTEIKANYAERVIKTVKAKIYRYMTYKQSQRYVDRLEDFNTNYNSTFHRTIGMAPDKVNESKE
TNLWWKMYWPKKPLVARKLKQTRKPFKFNVGDRVRVTHIRNPFTREYDQKWSGELFIIADRRVRGGIPVYKLKDYLEEDI
IGTFYQPELQKVDIREDDVFKIETILKTKGRGRSREMALLAFQI

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