Gene
| Gene Model ID | pfu_aug2.0_1754.1_15231 |
|---|---|
| Locus | scaffold1754.1 : 111808 ... 134485 : - |
| To GenomeBrowser | scaffold1754.1:111808..134485 |
| Genes list of scaffold | scaffold1754.1 |
| Synonym | pfu_aug1.0_97.1_57968 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1754.1_15231.t1 | 1 | 1 | rve | 633 | 746 | 6.5e-24 | 84.3 | 5.3e-27 | 2.0e-23 | 82.8 |
| pfu_aug2.0_1754.1_15231.t1 | 1 | 1 | BTB_2 | 1106 | 1201 | 7.6e-15 | 54.8 | 7.9e-18 | 2.9e-14 | 53.0 |
Transcript
| Transcript ID | pfu_aug2.0_1754.1_15231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1754.1_15231.t1 atgaatctctcggataaggaagttgaactatataaacatagttgtgtgggatcattagaggaaataacctctccccctaa gattaagaattacatggccgtatcagacattagtctagaggaaagtaccactcccaaaactttgccagaaaatctggaaa acttatatcaagattcctgtaaaggattaagttcagaagaagaagcccaatttagggacttactatttaaatatcaggga tgtttctcagtaaactcacaagacatgggtcttactaatttggtcgaacacaaaatagacactgggaataataaacccat taaacaagcccctagaagaatccctattgcaaaaatgcaagatgtagacagggaagatatgatggataagggggtaatcg aggagtcagatagcccttggagttcccctataatcctagtgaaaaagaaagataacattatcaggttttgcatatatttt cgcaaacttaatgaaatcacagttaaggatagtcaccccattcccagcatagactccatattagatcctctatcaggttc taagttctattctaccatagacttaaaaagtggggatgcaaaccttaaaatgaaccctaagaaatgcaaacttttgcaaa gggaggttgcatatctgggacatactttcagtgaaaagggagtcagtacagaccctgctaaaattgaggcagtacaaaat tggcccgtacctaaaaatgtaaagaatgttagaagttttctaggaatttgctcctactataggaaatttgtgtgtcaatt ttctgttattgccaagcccttacacaaaccgactgaaaagacccagaaatttgtatgggattcaggttgtcaggaagctt tcgataagcttaagagagcgttaacgagcaccccaatcctttcataccctagaaaagagggacaatatctgttagataca gatgcttcaaacacagggatgggctctgttttatcacacattcaagatggggaagaaaaagttatatgttattatagtaa gctattcaatgctgcaggacgtaggtattgcgttactagacgggaattactagccatagtccaatcgatcaaacattttc atcattatttatatgggcaaaccttcaaagtaaggacataccatggatctttacaatggctgttaagatttaaaaatccc gaaggtcagatagcccgatggctagaaactttatcttcccaccaatttattatagaacataggccaggtaggttacacgg gaacgcagacgctttatcccgtaggccatgcgcagagatatattgtggttattgcactaaagcggaagcaaggtaccaac ctgaaaaacctgctcacagttgtttagccgtagaaactagggcacaaacatattctaaaaccacacctgaaaaagatagg gacagtgaacatttcaatatatatatagatataacaaaatgtcaacttgatgacccagaattatcttatgtaattaagtg ggtacaagacgggactcagcccgaatggaaagatatatcctctcttagtgaaacttgtaaaatttactgggtaaaatttg aatctttaaaatacatatataatattctatattgtcagacccaggaaaagatagatgggaaatattgcattgtaatccct aaatctttagtgggaaaagtcttagccctcctacataacagtacaacgggaggccatctaggcataaaaaagaccctctc aaaagtaaggaagagatttttctggtacaggatgagcactgatacaaaacattggtgttcaacatgtgacatatgtgagt caagaaaatccccaaataggaggataagggccccgctacagaaatatgtagttggtgcaccattagagcgaattgccatt gacattatgggaccattacccaagtcaaataaggaaaacctttatatcttagtagtaggtgattactttactaaatgggt agatgctatccctattcgtaatcaaaaagccactacaatagcccaaaaactagtacataggataataagtatttttgggg tacccatgcaaatacatagtgaccagggaaagtcgtttgaatccaatgtattcaaagaaatgtgtaatttattgggaata gagaaaactcgcacatcaccatatcgaccgcaatcagacgggatgatagagcgggcaaatagatctatagaaaacatgtt ggcttcatttgtatcccaaaatcaaaaagattgggacgaatacttatccttacttatgctagcttataggtcagctgaac atgaaactacaggtgtcagtccgtacgaaatgatgtttggtaggcatgtttctctcccagttgacatcataatgggaagg ctagaacctgaaaataaagtgggaatgtcagaacatgcttacaaattgtctcaaagaatagacaaaatacatgaatttgc tagggctagaataaaattatctacagagaaaatggttagagaatacaactctaagattaaccataaaagttatgatgaag gtgaccttgtttggtattatgcccataatgcatgcaaaatgggaacaccaaaactacagtgtcatgggtccagagattta actgcgggctctgtgatgaacctagagaatttacgcagcaggcacactgtgaaagacatgacgtcagttcactctggctt cacattcctctgtggagagtgcaatctaaccatgacgcgagtagaccaacgccatggctgcgagcggaaggctttacata gggtaaaaagagaccctcacgatgacgcccgaggaagcccgggaaatcgagaaattccagcaagaacgggggaaacatgt tatgccctttatgaaggagctgcccctggacccagcagaacccaaactacaggaccttgctgccacggaaccccaactac aggacctcgctgccaaagaacccaaacaacaggaccccacagaccccactcttcaggacccagcagaccccactcaacag gaccctgcagaccagaccagaaagaaaagctagctcgcacgtttaaacgcctttttggggatgagccagccctaagtgaa aacgaggaggaggatgacaactgcccccttgtatcccctgatatatccatcagcgagcccgtccaagtgtcaacgccatc taggaccgttataataacccgagaacgagaattcgacaaactagatagcgggacccagacaaagccagatgacttaggac ccttggaggaattacgtaccatgcagaaagaggtggttgagttaattgttggaggtagatcgttcctgactacttctagg accctcacaaagtatcctgaatccttactgtccaagatgatcaaccacacggacgtctcacccatgaagacaacacctga tgggattgccgtatattttctggatagagacccagagtttttccccgttgtcctacatttcctccgggatggaccgatga acatccagtgccatcttcccacagatccagttagtctgcgcaaaatccatatggaagccatctattatggaatttttaaa ctgtcaagtattgtcgcccaccattttgaagttgagggttcacagtcgaaagacgattggagtcgagtagttacagaaca gtga |
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Protein
| Protein ID | pfu_aug2.0_1754.1_15231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1754.1_15231.t1 MNLSDKEVELYKHSCVGSLEEITSPPKIKNYMAVSDISLEESTTPKTLPENLENLYQDSCKGLSSEEEAQFRDLLFKYQG CFSVNSQDMGLTNLVEHKIDTGNNKPIKQAPRRIPIAKMQDVDREDMMDKGVIEESDSPWSSPIILVKKKDNIIRFCIYF RKLNEITVKDSHPIPSIDSILDPLSGSKFYSTIDLKSGDANLKMNPKKCKLLQREVAYLGHTFSEKGVSTDPAKIEAVQN WPVPKNVKNVRSFLGICSYYRKFVCQFSVIAKPLHKPTEKTQKFVWDSGCQEAFDKLKRALTSTPILSYPRKEGQYLLDT DASNTGMGSVLSHIQDGEEKVICYYSKLFNAAGRRYCVTRRELLAIVQSIKHFHHYLYGQTFKVRTYHGSLQWLLRFKNP EGQIARWLETLSSHQFIIEHRPGRLHGNADALSRRPCAEIYCGYCTKAEARYQPEKPAHSCLAVETRAQTYSKTTPEKDR DSEHFNIYIDITKCQLDDPELSYVIKWVQDGTQPEWKDISSLSETCKIYWVKFESLKYIYNILYCQTQEKIDGKYCIVIP KSLVGKVLALLHNSTTGGHLGIKKTLSKVRKRFFWYRMSTDTKHWCSTCDICESRKSPNRRIRAPLQKYVVGAPLERIAI DIMGPLPKSNKENLYILVVGDYFTKWVDAIPIRNQKATTIAQKLVHRIISIFGVPMQIHSDQGKSFESNVFKEMCNLLGI EKTRTSPYRPQSDGMIERANRSIENMLASFVSQNQKDWDEYLSLLMLAYRSAEHETTGVSPYEMMFGRHVSLPVDIIMGR LEPENKVGMSEHAYKLSQRIDKIHEFARARIKLSTEKMVREYNSKINHKSYDEGDLVWYYAHNACKMGTPKLQCHGSRDL TAGSVMNLENLRSRHTVKDMTSVHSGFTFLCGECNLTMTRVDQRHGCERKALHRVKRDPHDDARGSPGNREIPARTGETC YALYEGAAPGPSRTQTTGPCCHGTPTTGPRCQRTQTTGPHRPHSSGPSRPHSTGPCRPDQKEKLARTFKRLFGDEPALSE NEEEDDNCPLVSPDISISEPVQVSTPSRTVIITREREFDKLDSGTQTKPDDLGPLEELRTMQKEVVELIVGGRSFLTTSR TLTKYPESLLSKMINHTDVSPMKTTPDGIAVYFLDRDPEFFPVVLHFLRDGPMNIQCHLPTDPVSLRKIHMEAIYYGIFK LSSIVAHHFEVEGSQSKDDWSRVVTEQ |
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