Gene
| Gene Model ID | pfu_aug2.0_1754.1_15228 |
|---|---|
| Locus | scaffold1754.1 : 40706 ... 45460 : + |
| To GenomeBrowser | scaffold1754.1:40706..45460 |
| Genes list of scaffold | scaffold1754.1 |
| Synonym | pfu_aug1.0_48112.1_48665 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1754.1_15228.t1 | 1 | 1 | Helicase_C | 223 | 292 | 7.7e-11 | 41.7 | 2.7e-14 | 2.0e-10 | 40.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1754.1_15228.t1 | gi|156399702|ref|XP_001638640.1| | predicted protein [Nematostella vectensis] | 5.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1754.1_15228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1754.1_15228.t1 atggagtctgagagttcaagtacaacgacaagtgaaccagaacttacgtctgtgagggggagagcaagaggaagaccgcc gaggagaggacgcggtcgtggacggggtagaggaggtaggtcaaggagggatgtgggccctcgccgtgatgtggttgccc ttgataacttagcacagaggagatcatcaacaaaagacagtctgcgtgcactcactagagaagaaagacaggaaatactg ttggcaggaaccgatatatacatctccatggtcattgatctgctggacagaggggaagggccaccaagtggaggacacca tcaaccatccggaggaatgccccagattggtgcagctgcagaaaatgcagagatatgcccacagctgctgagagggtctg ctgatttcagagtattaattctcgatgagtcggttttgagattagcccagctgtaccggcaagacatgttagccttggat gaggatgcagacataaaccgaggctaccgacatgccttatacaggcaatttgtgctttggacatacggcagacttggggc tggtgttcgaaaggtcatcccaagttgttgtgtctgggccatacgggacaaatacccagacgcatttggacagtatgttg gatttgtgccaaagatggattatgtacaaatgtttcattcgaaaattacggaggatgttaaggatgatattcggaaagat atggagaaagaggatggccatattcgtgtcctgatagcttccagtgcggcgggaatgggagtaaactttaaggggctgta cgaagtaatcaagtatggacctcctaaagatatggacgcttttgttcagcaattcggacgtgtgggaagggatggtgtgc agtcgaaggctctactgttatacaaaggtaaacagtgtaaaaatgtcgactcggatatgaaagcttatctctctaatgta catttgtgtagaagaaagtgtttgttggaggcatacaatgcacagccctctgtaacagttaaacacatgtgttgtgacat ctgctcaaaagagtgtgcatgtggagagcctgaatgtgatactttatccagtccgtactctgaggatgtggcatcacaaa gttcagacatgtcggaaacagaatctgaggtagtgatgttgaccagatgtaatcagtgtgatttttttgtaatgaaattt tcatcatga |
|
Protein
| Protein ID | pfu_aug2.0_1754.1_15228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1754.1_15228.t1 MESESSSTTTSEPELTSVRGRARGRPPRRGRGRGRGRGGRSRRDVGPRRDVVALDNLAQRRSSTKDSLRALTREERQEIL LAGTDIYISMVIDLLDRGEGPPSGGHHQPSGGMPQIGAAAENAEICPQLLRGSADFRVLILDESVLRLAQLYRQDMLALD EDADINRGYRHALYRQFVLWTYGRLGAGVRKVIPSCCVWAIRDKYPDAFGQYVGFVPKMDYVQMFHSKITEDVKDDIRKD MEKEDGHIRVLIASSAAGMGVNFKGLYEVIKYGPPKDMDAFVQQFGRVGRDGVQSKALLLYKGKQCKNVDSDMKAYLSNV HLCRRKCLLEAYNAQPSVTVKHMCCDICSKECACGEPECDTLSSPYSEDVASQSSDMSETESEVVMLTRCNQCDFFVMKF SS |
|