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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1701.1_05188
Locus scaffold1701.1 : 58279 ... 62925 : -
To GenomeBrowser scaffold1701.1:58279..62925
Genes list of scaffold scaffold1701.1
Synonym pfu_aug1.0_9412.1_24560

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1701.1_05188.t1 gi|676458464|ref|XP_009054984.1| hypothetical protein LOTGIDRAFT_232409 [Lottia gigantea] 3.0e-31
pfu_aug2.0_1701.1_05188.t1 gi|524915436|ref|XP_005112517.1| PREDICTED: 39S ribosomal protein L32, mitochondrial-like [Aplysia californica] 1.0e-28
pfu_aug2.0_1701.1_05188.t1 gi|194904992|ref|XP_001981098.1| GG11798 [Drosophila erecta] 2.0e-22
pfu_aug2.0_1701.1_05188.t1 gi|195505404|ref|XP_002099489.1| GE10925 [Drosophila yakuba] 3.0e-22
pfu_aug2.0_1701.1_05188.t1 gi|195158220|ref|XP_002019990.1| GL13736 [Drosophila persimilis] 4.0e-22

Transcript
Transcript IDpfu_aug2.0_1701.1_05188.t1
Definition-
>pfu_aug2.0_1701.1_05188.t1
atggcagttgacagacttcgttgttgcattaatcgccttataaaagacataaatagactttcttttgtttgcagtgccag
agcatatccaaaactacagtcactgcagtcaccatggcaagagccagcgccatgtgtaataggaattgatgggatagaga
gtcaaaccactccatcacaccccgacatagcgtctttgtttcctgcttttacttggtttaaagtccccaagaaaatcagg
tcattagaacgaaggcttacacggaaatttggtcagagtagaatggaaaagtatacaaagattgaaaggcgaattctgat
gtgtttggagtgcggtcactggtacgaggctggcactctatgtggaaactgttaccagaaggtcaaacgtgagacggcgg
aacaaatggccaaaatgggagacgatctgacctacaactcaccgttatcagaagttgtcgttagatacgagggtgaggag
gttagagaaacggaatcaggaaaatatgtagtggaaatgaagaaagaaaaaccacagtggttctctgataaactgatgaa
aaaagccagctga

Protein
Protein IDpfu_aug2.0_1701.1_05188.t1
Definition-
>pfu_aug2.0_1701.1_05188.t1
MAVDRLRCCINRLIKDINRLSFVCSARAYPKLQSLQSPWQEPAPCVIGIDGIESQTTPSHPDIASLFPAFTWFKVPKKIR
SLERRLTRKFGQSRMEKYTKIERRILMCLECGHWYEAGTLCGNCYQKVKRETAEQMAKMGDDLTYNSPLSEVVVRYEGEE
VRETESGKYVVEMKKEKPQWFSDKLMKKAS

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