Gene
| Gene Model ID | pfu_aug2.0_1676.1_21735 |
|---|---|
| Locus | scaffold1676.1 : 17036 ... 22199 : + |
| To GenomeBrowser | scaffold1676.1:17036..22199 |
| Genes list of scaffold | scaffold1676.1 |
| Synonym | pfu_aug1.0_13284.1_32307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1676.1_21735.t1 | 2 | 1 | DEP | 5 | 87 | 2.4e-13 | 49.6 | 3.2e-17 | 2.4e-13 | 49.6 |
| pfu_aug2.0_1676.1_21735.t1 | 2 | 2 | DEP | 477 | 492 | 2.4e-13 | 49.6 | 0.96 | 7100.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1676.1_21735.t1 | gi|676474716|ref|XP_009060229.1| | hypothetical protein LOTGIDRAFT_106755, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1676.1_21735.t1 | gi|524867695|ref|XP_005090655.1| | PREDICTED: DEP domain-containing protein 7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1676.1_21735.t1 | gi|260797795|ref|XP_002593887.1| | hypothetical protein BRAFLDRAFT_214790 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1676.1_21735.t1 | gi|551518597|ref|XP_005810795.1| | PREDICTED: DEP domain-containing protein 7-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_1676.1_21735.t1 | gi|699653022|ref|XP_009896834.1| | PREDICTED: DEP domain-containing protein 4 [Picoides pubescens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1676.1_21735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1676.1_21735.t1 atgaagagtaatgtcgtctgcaaacgtcatcgtctgaagatgcgtaactatgacaactgttttacgggcgcacatgctgt tgacgtagtgatgacgtatttacttagtgacaggaacaccttcagtaccgacttgtcacgggataaagctatcaagcttt gtcagtccctgatggatcgccatgtgttctcatcagtgagttcaaggtcaagtgaagtgaagaagggatttgatgacagt cacaataaactgttccgttttgtcaacccagacagtgagagtaatattaacgagacctctaccattatagagacaagctc tgacgaggaccaggattactctattgtagaggatggtagaggaaaccagtcaatcagaatcagtagtgagaatgaccagg atttcctagatgacagtattatatgtaaccctgtggccgtcaataagaaaggacaggtacttcatgaaatcatcaacctt catcagtccttcacccggcggaaaagtcgcagctccctcaaagctgatacctctatactgtcccgtagtggcaaggagaa aactgcagaggtctcccaatctgccatagaaggtctgtggaaagaagttgctttgtgtcagctgctgaccatcattgatt tgccgtttttagacggaattctaacagcagacaaaaacgagaagaaacatatcaaacagaacattgtgatctcaaacgtg gttgccaaacattacaacatgccggcaaacggcatcaacaacgtgacagatccagtaatgagatctgctttaaactgtat agagtgcttacccaaaggtttattagtgctagaaagggagtttgttaaggaatgccaccctgcagccaaaatccaggctt tccaagtgctaagtgaacattacagtaagattgaggagcccctcctccctgagaggtttctggatctgcacctgaacatt ttgaacctggttctgcagcagaaaaataagcttgccctggaggccctgcagctggatatgatcatattaccatggaacat taaggaggagctacataggctcctcaagtttatgtcagcttgtgcctctttggaggagtttcagcttgattctaaggtag ataatgagaacctaatcctggacacgttcactgactgtatcatcagacataaagtggtagctcacaaactggctcgtgtt ctcgtattattccttatgaacaacttgcaggaaatattcaccataccgaaaatcatcaaggatagagttgcttcccgtat ggacgatctaaagacgggggaggtgtcacctgtgagagacataacctactgtagtcaagtcagcttagaacagtacaaga agcaggcagtggaaggcaccaaaagtgcgttagtcgacatgatgaacggtattctggacaacacaaccatatcgctcaaa gaaaagaaacaacgactcaaacaattccagaaatgtcaccctcaactctatgctcaacatttcagcgagatgttgtga |
|
Protein
| Protein ID | pfu_aug2.0_1676.1_21735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1676.1_21735.t1 MKSNVVCKRHRLKMRNYDNCFTGAHAVDVVMTYLLSDRNTFSTDLSRDKAIKLCQSLMDRHVFSSVSSRSSEVKKGFDDS HNKLFRFVNPDSESNINETSTIIETSSDEDQDYSIVEDGRGNQSIRISSENDQDFLDDSIICNPVAVNKKGQVLHEIINL HQSFTRRKSRSSLKADTSILSRSGKEKTAEVSQSAIEGLWKEVALCQLLTIIDLPFLDGILTADKNEKKHIKQNIVISNV VAKHYNMPANGINNVTDPVMRSALNCIECLPKGLLVLEREFVKECHPAAKIQAFQVLSEHYSKIEEPLLPERFLDLHLNI LNLVLQQKNKLALEALQLDMIILPWNIKEELHRLLKFMSACASLEEFQLDSKVDNENLILDTFTDCIIRHKVVAHKLARV LVLFLMNNLQEIFTIPKIIKDRVASRMDDLKTGEVSPVRDITYCSQVSLEQYKKQAVEGTKSALVDMMNGILDNTTISLK EKKQRLKQFQKCHPQLYAQHFSEML |
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