Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1664.1_15183
Locus scaffold1664.1 : 115591 ... 124505 : -
To GenomeBrowser scaffold1664.1:115591..124505
Genes list of scaffold scaffold1664.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1664.1_15183.t1 1 1 Sulfotransfer_1 22 209 1.2e-36 126.3 9.99995e-41 1.5e-36 126.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1664.1_15183.t1 gi|410895875|ref|XP_003961425.1| PREDICTED: sulfotransferase family cytosolic 2B member 1-like [Takifugu rubripes] 3.0e-28
pfu_aug2.0_1664.1_15183.t1 gi|507573422|ref|XP_004670297.1| PREDICTED: sulfotransferase 1A1 [Jaculus jaculus] 7.0e-27
pfu_aug2.0_1664.1_15183.t1 gi|706129284|ref|XP_010199202.1| PREDICTED: sulfotransferase family cytosolic 1B member 1-like [Colius striatus] 1.0e-26

Transcript
Transcript IDpfu_aug2.0_1664.1_15183.t1
Definition-
>pfu_aug2.0_1664.1_15183.t1
atgattctaagaagatcaactgagtattcccatgccgtaatgcaactgatagattgtacagaggtttcggaactgaacaa
aagcctcacacaaagaccaaggatattcactagccatttccaaccgcagttcataccagaagatgctctgaccaactcca
ccaaaattatttacgtttacagaaaccctaaagatgtagcagtctcattctttaactttgtaagaaagttgaaagcgttt
gagggatacagaaacgcggaatggaagaatttcttgagcctctacctcgatggaaaagtaccatatggagactggatttc
tcatgtcaaagattggctagatttcacgagtgagcactcaagctatcccatcttaaagttgagctacgaagaaatgaaag
agaatctccatgacaacgtcgtaaaaatagcaaaatttttgaatgcggacattgacgagtcatttatttcgaagatagca
caacgttgtcaatttcaaaacatgcactttcacaataatacaagtcttccgcaagcggtgacgaaaataacagaactgaa
ggaaaacatcttctacagaaaagtctcttcgtccagctggttccactcaatagatgtccttacaaagagagaattcctga
attggtcagttctacttgataacactatgactgttctgctattttaa

Protein
Protein IDpfu_aug2.0_1664.1_15183.t1
Definition-
>pfu_aug2.0_1664.1_15183.t1
MILRRSTEYSHAVMQLIDCTEVSELNKSLTQRPRIFTSHFQPQFIPEDALTNSTKIIYVYRNPKDVAVSFFNFVRKLKAF
EGYRNAEWKNFLSLYLDGKVPYGDWISHVKDWLDFTSEHSSYPILKLSYEEMKENLHDNVVKIAKFLNADIDESFISKIA
QRCQFQNMHFHNNTSLPQAVTKITELKENIFYRKVSSSSWFHSIDVLTKREFLNWSVLLDNTMTVLLF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495