Gene
| Gene Model ID | pfu_aug2.0_1612.1_08474 |
|---|---|
| Locus | scaffold1612.1 : 75116 ... 90826 : + |
| To GenomeBrowser | scaffold1612.1:75116..90826 |
| Genes list of scaffold | scaffold1612.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pra1 family protein 3-like | GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1612.1_08474.t1 | 1 | 1 | PRA1 | 3 | 156 | 2.3e-36 | 124.4 | 1.2e-39 | 2.6e-36 | 124.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1612.1_08474.t1 | gi|676454412|ref|XP_009053672.1| | hypothetical protein LOTGIDRAFT_188561 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1612.1_08474.t1 | gi|524897925|ref|XP_005105417.1| | PREDICTED: PRA1 family protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1612.1_08474.t1 | gi|91095167|ref|XP_968412.1| | PREDICTED: PRA1 family protein 3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1612.1_08474.t1 | gi|410901651|ref|XP_003964309.1| | PREDICTED: PRA1 family protein 2 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_1612.1_08474.t1 | gi|584023304|ref|XP_006806295.1| | PREDICTED: PRA1 family protein 3-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1612.1_08474.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08474.t1 atggttgatgtgcaagttgcaccattgagaagcctcggcgactttcttttagaatcagcaagattccaagtgccaaattt ccgtgatcaagaaaaatgggccaacagagtcttgaataatttgctgtattaccaaaccaattactttcttactgctattg tcttgttcttattgataggaattgtgcatccagtgaagatggtgtgtggttttgctgccatatctatagcctttggagtg tttgtatactgtacaaacagccagtggagtgctcgtagattcaagaggaaccatcccctcgttagtgtaatggtgatcct agccactggttacctagtggtgtacctgattggagctgtcatagtcttcatgtttggaatagctttcccattacttttga taattgtccatgcatcattgaggttaaggagtataaagaataagataacaaatagactggagcacgtaggcttgaagcga acacccatgggaatcattctggagggcctgggtcaggagcaggaggcaggttcatag |
|
Protein
| Protein ID | pfu_aug2.0_1612.1_08474.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08474.t1 MVDVQVAPLRSLGDFLLESARFQVPNFRDQEKWANRVLNNLLYYQTNYFLTAIVLFLLIGIVHPVKMVCGFAAISIAFGV FVYCTNSQWSARRFKRNHPLVSVMVILATGYLVVYLIGAVIVFMFGIAFPLLLIIVHASLRLRSIKNKITNRLEHVGLKR TPMGIILEGLGQEQEAGS |
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