Gene
| Gene Model ID | pfu_aug2.0_1574.1_15124 |
|---|---|
| Locus | scaffold1574.1 : 116638 ... 126875 : - |
| To GenomeBrowser | scaffold1574.1:116638..126875 |
| Genes list of scaffold | scaffold1574.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hepatocyte growth factor-like protein | GO:0001568 GO:0001892 GO:0005576 GO:0007596 GO:0008233 GO:0009888 GO:0019897 GO:0030154 GO:0051241 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1574.1_15124.t1 | 5 | 1 | Kringle | 8 | 49 | 2.3e-25 | 88.4 | 7.2e-15 | 5.3e-11 | 42.4 |
| pfu_aug2.0_1574.1_15124.t1 | 5 | 2 | Kringle | 72 | 144 | 2.3e-25 | 88.4 | 3.6e-20 | 2.7e-16 | 59.4 |
| pfu_aug2.0_1574.1_15124.t1 | 5 | 3 | Kringle | 176 | 186 | 2.3e-25 | 88.4 | 0.85 | 6300.0 | -2.7 |
| pfu_aug2.0_1574.1_15124.t1 | 5 | 4 | Kringle | 228 | 228 | 2.3e-25 | 88.4 | 1.4 | 10000.0 | -3.4 |
| pfu_aug2.0_1574.1_15124.t1 | 5 | 5 | Kringle | 254 | 268 | 2.3e-25 | 88.4 | 0.44 | 3300.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1574.1_15124.t1 | gi|260791888|ref|XP_002590959.1| | hypothetical protein BRAFLDRAFT_250118 [Branchiostoma floridae] | 4.0e-30 |
| pfu_aug2.0_1574.1_15124.t1 | gi|260828546|ref|XP_002609224.1| | hypothetical protein BRAFLDRAFT_125972 [Branchiostoma floridae] | 2.0e-29 |
| pfu_aug2.0_1574.1_15124.t1 | gi|505843606|ref|XP_004615300.1| | PREDICTED: hepatocyte growth factor-like protein [Sorex araneus] | 5.0e-29 |
| pfu_aug2.0_1574.1_15124.t1 | gi|512849835|ref|XP_004915633.1| | PREDICTED: hepatocyte growth factor-like protein isoform X4 [Xenopus (Silurana) tropicalis] | 9.0e-29 |
| pfu_aug2.0_1574.1_15124.t1 | gi|548480711|ref|XP_005685012.1| | PREDICTED: plasminogen-like isoform X2 [Capra hircus] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1574.1_15124.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15124.t1 atgccgtgggcgagctcaaaccctcatagtcacaggtttacatatgtcaagggacaattctgccgtaaccctgacaacga accacgcacttggtgctataccacagatccggaagtcagatatgaattttgtaacgtaacagcatgcggtaatcagataa atactctggatttacaaaatatacattatgtagtctagactacaaactctacttgttacgagaacagccgtgagagacca tacagtggaaccataaacataaccgtcacggggtacccatgtcaaagatgggattcacagtcccccaacagacacacctt cactgacgtgtcagaggagaattactgccgtacacctgacggcgctgttgtaccgtggtgttactccacaaaccctacaa aaaggtgggaggagtgccagattgtaccctgtgagaaatcagctactgtttacggttgttatgaaggctgggaggattat ggtgggaactgttataagattgaaaagaatatgtccacttggagagaagctgactcggcgtgtaagaaaatggattctga actaacttcaatacttactggggaagagcaacagtttattcttggtatcatgtctgcagatttgtgtttcaacacgcgca aactctctgactgcaagaaatgggcggatcaaggagactgcgtgaaggatccgctgttcatgattcaatattgtcgccag tcatgtgaccatgaagtcttctgcaatacagattgcgcaatggatgcgcacgagaattctgcgcagtgtggacgatggca gacttccggggagtgtgttcggaaccctcgatgctgtcacattgtgcttattcttgtcaagtttgctcaaatggtaacat caattaaacataaaaaatttgtcatttatatcataaacttatcttattggtgcgtctctaaggtatcttag |
|
Protein
| Protein ID | pfu_aug2.0_1574.1_15124.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15124.t1 MPWASSNPHSHRFTYVKGQFCRNPDNEPRTWCYTTDPEVRYEFCNVTACGNQINTLDLQNIHYVVXTTNSTCYENSRERP YSGTINITVTGYPCQRWDSQSPNRHTFTDVSEENYCRTPDGAVVPWCYSTNPTKRWEECQIVPCEKSATVYGCYEGWEDY GGNCYKIEKNMSTWREADSACKKMDSELTSILTGEEQQFILGIMSADLCFNTRKLSDCKKWADQGDCVKDPLFMIQYCRQ SCDHEVFCNTDCAMDAHENSAQCGRWQTSGECVRNPRCCHIVLILVKFAQMVTSIKHKKFVIYIINLSYWCVSKVS |
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