Gene
| Gene Model ID | pfu_aug2.0_151.1_03713 |
|---|---|
| Locus | scaffold151.1 : 326938 ... 353596 : - |
| To GenomeBrowser | scaffold151.1:326938..353596 |
| Genes list of scaffold | scaffold151.1 |
| Synonym | pfu_aug1.0_59283.1_63545 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_151.1_03713.t1 | 2 | 1 | Cadherin-like | 9 | 42 | 2.9e-16 | 59.4 | 6.9e-05 | 0.34 | 11.2 |
| pfu_aug2.0_151.1_03713.t1 | 2 | 2 | Cadherin-like | 50 | 136 | 2.9e-16 | 59.4 | 1.4e-15 | 6.8e-12 | 45.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_151.1_03713.t1 | gi|676479075|ref|XP_009061630.1| | hypothetical protein LOTGIDRAFT_234972 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_151.1_03713.t1 | gi|524882564|ref|XP_005097924.1| | PREDICTED: uncharacterized protein LOC101863019 [Aplysia californica] | 0.0 |
| pfu_aug2.0_151.1_03713.t1 | gi|260822501|ref|XP_002606640.1| | hypothetical protein BRAFLDRAFT_120093 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_151.1_03713.t1 | gi|390331439|ref|XP_800100.3| | 0.0 | |
| pfu_aug2.0_151.1_03713.t1 | gi|699247066|ref|XP_009859922.1| | PREDICTED: uncharacterized protein LOC104266112 [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_151.1_03713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03713.t1 atgaattttgaaggaggtggcggcgggaaagaagtaccgttgatagagggcgctgttgtggatgtcaggatagaagtttc ggctgaagatggtaccatcaaaaactactacatccatgccaaacggctctccgctaaagacgctactctcagtgatctcc aacttacaggaggaaagctggttcccagtttcagtccggatgttacgtattattcttgtttactgccctgtaatgtagca aatgtgacgctgaaacccgtagcccctgaccccaagaatgttgtaaccgtgtgtggggagaagccagggatgcctacgcc cctaaacgtgggagaaacaaacattcctgtggaagttacatcagcagacggatcaaataaacagatttacagcattgatg ttatgagaaaacaagtaccgcggtacgtcaaaatagtggatgcttccttagcacaaaaatacgagtgtccgtactcactg tcaccaatttatcgaccaataaccatcagggggagtgacccaaaacacacatactccgccccgaatctagaggagaaaac aagaaccaataaagtcgatcctctcagcggaatgccgtttgggaaggattggaaaatcattgattacgagttggataaac aagttgcttctactgtagcgaaaattccactcacaaatggaggtttctcgtcggagggaaaaattggagcgcttgcagct gatatagctaaatgtaacatatccccaacagctgctgatgtaaaggacaaattcaaggacactcaagctcctataaacca tacagttcaggtagcagaaatactggcgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgtcaccaaat tgagaggagctggtgcagaatttgtagagaaatactttgactcgttaccaaagccaggacagtcaagacagtggacggaa ggggaatcccctcttgaccacttggaaaatgcatcattcttttatgctaccgctataaagtttaagccaaaggacgcgta cctacacatgagattgggccaagttctagaggagagatactatgccgaagatctgtttggactgaagaaagaagaggaag cagaggcacttccgtccttcaacatccaggccaaagagagttcaaaggacgaggagtgtgctgccatctgtaagttacga ggtgtggatgctgggaccgcacccatagccctgcagctgaaggccatagatgaggagtaccacgcccttgtggacagtgg ccagggtgggaaggcggaccatgtacaaggcctgtatgtttggaagtcaaaacaggcatcacaggaagggttagcagctc aaaaagcccaggatgaagaatcgcccctcggacaagcgtacctaaaatacatggacgccctgtcactagacgaggccaaa gctatttataactttcacgtaggtcgtttgcttgtgatacagggtaattttgacgatgctgtgaagagattggaggttac gctaaactggaacccttctcatcagttagcaagattttacttagggctagcactggcacttcagaagaatggcccaggta ccagagcgaaggagacgattggttacttagtggaagccatggaaacgcttctgactgaaaacactaaagccagtatgacc gctacagatccaagggagatagaaagcgagctgcactctgagcgtctgttgagatccactaacgtccatctgttacgggg tatagtacaactcgggtgtcttctacagagaaattctgacgtcaaagactgcatgtcacctcaggacgtcttccacagct cagcattattggcagcccagatcctgccctacgttgccaggggcgacggatataaacaactagagtgggtgctgttagaa tcgcatgcccatcttctagaaatactcactgccgtaaaagacaatcctaacacgtcgcttatcgatcagagatgtcagag gttatctgcccttatcatcaactctacgttacctatgaatgaggcgctactttcattacaagagaggtggtggcaggaca aagtgaaagcagaggaggaggctaagaaggcagaggaagccaagaaagctcctccagcagccaagcctggggcaggagga gctgcgaagcccggggcagggaaggcagctccagcaagaggcggggctgcagcaagaggggcacctgctgccagggggag aggagcacctgctgcaccagctagaggtggcgctagtgttcgtggaggaccagccaccagaggaggtcctgctgctaagg ttcatgatgcgtgtatagaattagcggagatgttggcacaatctgatcccaagggagctgtggacatttactgtaaattt ccgatctccgaccctcctacttttgacgatggctacattcttggagaaatcgtcaggctgatgatgaaggcagaaagcta tgacgatacaagactggcaaaaaatatgatactttatggaaaagtctatggcttagaatcggcagcgtttacgtccgatg ccgttccaagagggaagtaa |
|
Protein
| Protein ID | pfu_aug2.0_151.1_03713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_151.1_03713.t1 MNFEGGGGGKEVPLIEGAVVDVRIEVSAEDGTIKNYYIHAKRLSAKDATLSDLQLTGGKLVPSFSPDVTYYSCLLPCNVA NVTLKPVAPDPKNVVTVCGEKPGMPTPLNVGETNIPVEVTSADGSNKQIYSIDVMRKQVPRYVKIVDASLAQKYECPYSL SPIYRPITIRGSDPKHTYSAPNLEEKTRTNKVDPLSGMPFGKDWKIIDYELDKQVASTVAKIPLTNGGFSSEGKIGALAA DIAKCNISPTAADVKDKFKDTQAPINHTVQVAEILAXXXXXXXXXXXXXXVTKLRGAGAEFVEKYFDSLPKPGQSRQWTE GESPLDHLENASFFYATAIKFKPKDAYLHMRLGQVLEERYYAEDLFGLKKEEEAEALPSFNIQAKESSKDEECAAICKLR GVDAGTAPIALQLKAIDEEYHALVDSGQGGKADHVQGLYVWKSKQASQEGLAAQKAQDEESPLGQAYLKYMDALSLDEAK AIYNFHVGRLLVIQGNFDDAVKRLEVTLNWNPSHQLARFYLGLALALQKNGPGTRAKETIGYLVEAMETLLTENTKASMT ATDPREIESELHSERLLRSTNVHLLRGIVQLGCLLQRNSDVKDCMSPQDVFHSSALLAAQILPYVARGDGYKQLEWVLLE SHAHLLEILTAVKDNPNTSLIDQRCQRLSALIINSTLPMNEALLSLQERWWQDKVKAEEEAKKAEEAKKAPPAAKPGAGG AAKPGAGKAAPARGGAAARGAPAARGRGAPAAPARGGASVRGGPATRGGPAAKVHDACIELAEMLAQSDPKGAVDIYCKF PISDPPTFDDGYILGEIVRLMMKAESYDDTRLAKNMILYGKVYGLESAAFTSDAVPRGK |
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