Gene
| Gene Model ID | pfu_aug2.0_1490.1_01664 |
|---|---|
| Locus | scaffold1490.1 : 56386 ... 58455 : - |
| To GenomeBrowser | scaffold1490.1:56386..58455 |
| Genes list of scaffold | scaffold1490.1 |
| Synonym | pfu_aug1.0_10930.1_68261 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1490.1_01664.t1 | 1 | 1 | HTH_Tnp_4 | 179 | 231 | 6.2e-14 | 51.2 | 1.5e-17 | 1.1e-13 | 50.4 |
| pfu_aug2.0_1490.1_01664.t1 | 1 | 1 | DDE_Tnp_4 | 261 | 428 | 5.60519e-45 | 152.6 | 0.0 | 1.12104e-44 | 151.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1490.1_01664.t1 | gi|156385321|ref|XP_001633579.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1490.1_01664.t1 | gi|156349312|ref|XP_001622006.1| | hypothetical protein NEMVEDRAFT_v1g142904 [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1490.1_01664.t1 | gi|156358744|ref|XP_001624675.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1490.1_01664.t1 | gi|241812769|ref|XP_002414614.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_1490.1_01664.t1 | gi|156380002|ref|XP_001631744.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1490.1_01664.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1490.1_01664.t1 atgccgatttgcggtgtggttggttgctcaaagcgacccggggtcgacaaggaattttcctttcataaagtcccaacaat aatacgttatcagggcaatgagactttgaaattgtcagaggaaaggcgaagactatggaaaggtgctataaacagggcag atataacaggcgaagacaaatgggacaggactttaaagcaacaagtattatttagtgatgcaatagaaagttctgatagt gaatccaactgtatggaaacagatatacaagaaacaagtaatccgccctctgatgagacagttaatcatccgccaagtaa agaagtgcaaacaggactaacacgggaccatattcaacagttagaggatgacaataaagctaaacttttcacaagttctg tgcctactaaaggaatatatagcttctcgtactacgagaatgatccagaaagagtgagcttttatacaggattgccaaac attgcagttttgaggctagtgttccatttcatcatgtacttcatgtctgacaataagttgctttccaaggaacaggagtt tctattgtgccttgtgaaattgagactggattatcttttcaaagatattgcgtacagtcttgatgtttcgctttctacgg tacagagaagtttccatgatacactggatctgatgtatgttagactctcttttttagtgaaatggccatctcgagagaca ttacgaacatcaatgccaatgagttttcgcaaagattttggacagaaggtgtgtgttgtactagactgctttaaactttt tacagaaagaccaagtggctccttgaacaaagtgtacacatattccaactataagcagcatcaaactgtgaaatacttga ttggaatagctccacagggtgtcattactttcatatctgaaggctggggagggagaacttctgacaaattcattactgag aagtctggaattctacaaaacctacctgaagacatagtgatgagagatagagggttctgcattgaggaaagtgtgcattt ctacggtgcagaactagccataccaaatttcaccagaggaaagtcacagttgcatcccttagaagttgagaaaactagac gcattgcttcagtacgaattcatgttgagagagtaataggacttgttctgcgtaagtttagaatttttgatggcattatt ccccttgaatttgtcaaactgcgtaatggatctgaagtaccgaccattgacaagatagtgaaggttgcctgttgtttgac taacttgtgcgcatctgtggtaccatttgaccagtaa |
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Protein
| Protein ID | pfu_aug2.0_1490.1_01664.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1490.1_01664.t1 MPICGVVGCSKRPGVDKEFSFHKVPTIIRYQGNETLKLSEERRRLWKGAINRADITGEDKWDRTLKQQVLFSDAIESSDS ESNCMETDIQETSNPPSDETVNHPPSKEVQTGLTRDHIQQLEDDNKAKLFTSSVPTKGIYSFSYYENDPERVSFYTGLPN IAVLRLVFHFIMYFMSDNKLLSKEQEFLLCLVKLRLDYLFKDIAYSLDVSLSTVQRSFHDTLDLMYVRLSFLVKWPSRET LRTSMPMSFRKDFGQKVCVVLDCFKLFTERPSGSLNKVYTYSNYKQHQTVKYLIGIAPQGVITFISEGWGGRTSDKFITE KSGILQNLPEDIVMRDRGFCIEESVHFYGAELAIPNFTRGKSQLHPLEVEKTRRIASVRIHVERVIGLVLRKFRIFDGII PLEFVKLRNGSEVPTIDKIVKVACCLTNLCASVVPFDQ |
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