Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1470.1_01652
Locus scaffold1470.1 : 110917 ... 116525 : -
To GenomeBrowser scaffold1470.1:110917..116525
Genes list of scaffold scaffold1470.1
Synonym pfu_aug1.0_5921.1_31073

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1470.1_01652.t1 gi|676485382|ref|XP_009063640.1| hypothetical protein LOTGIDRAFT_229417 [Lottia gigantea] 2.0e-28
pfu_aug2.0_1470.1_01652.t1 gi|524899815|ref|XP_005106334.1| PREDICTED: uncharacterized protein LOC101851823 [Aplysia californica] 7.0e-18
pfu_aug2.0_1470.1_01652.t1 gi|488525559|ref|XP_004454627.1| 2.0e-06
pfu_aug2.0_1470.1_01652.t1 gi|390339267|ref|XP_790717.3| PREDICTED: centriole, cilia and spindle-associated protein [Strongylocentrotus purpuratus] 2.0e-06

Transcript
Transcript IDpfu_aug2.0_1470.1_01652.t1
Definition-
>pfu_aug2.0_1470.1_01652.t1
atggttggcaagaaatctgaataccgacatgaatataaaagagcaacattggttaataacataccaacatattacgagtc
cctgacgtaccgtaacaaacgcaaggagctagagtatgcccacacacctatatcctgggactttgagacgggggacattt
cgtcacctgatgatgaggtagaaaatttaccggtcggaaaaattgagctttctgatattaaagaacaagaggatagtgat
aagaagatatctgaggagtgtgtgttagacctaaaagatggaaaagcagatttaccaggagatgaagaggaggaatttaa
actaaaagacgacattatgattgaaaagtcaaccgcagaaacgagacaactaactaaacttgccaaggagaagctgaata
agtatgctagtacagaaaataccgacagtccagaaaaagtcaagccagctgttgaaaaagtcagatctgaagatgctgaa
gaggtaatcattaaacccaaatgtctgaatgataagacgttcatcaagagatccaaacctcgacgccctgacagaactca
gaccattccactgagaccaaaatctgccgcacccccaaagcgagctaaatcttctaagccacgccctaaatcagctgtat
cactagccgagtcagtggatcgacctcctttctatttatatgggagtggtgactcagagagagctactggaatcaagaga
actcacaatgttcactgctcaactgatatctacccagctgccttgaaggctctgaaacaacatgagcagagagtcaaatg
gagagaggaaatgcagagaaagttagccgctcagaaacagaagaaaaagaatccttttgcagagaaactcacaaaagaaa
cgagcgcctggcagagtgaatatcagcaacgctatcctttttatgacttcagtgaatacgagaaaagaatgcgtgccgta
gagtatgccaggtccagaaaagtcaaaaatgatttttag

Protein
Protein IDpfu_aug2.0_1470.1_01652.t1
Definition-
>pfu_aug2.0_1470.1_01652.t1
MVGKKSEYRHEYKRATLVNNIPTYYESLTYRNKRKELEYAHTPISWDFETGDISSPDDEVENLPVGKIELSDIKEQEDSD
KKISEECVLDLKDGKADLPGDEEEEFKLKDDIMIEKSTAETRQLTKLAKEKLNKYASTENTDSPEKVKPAVEKVRSEDAE
EVIIKPKCLNDKTFIKRSKPRRPDRTQTIPLRPKSAAPPKRAKSSKPRPKSAVSLAESVDRPPFYLYGSGDSERATGIKR
THNVHCSTDIYPAALKALKQHEQRVKWREEMQRKLAAQKQKKKNPFAEKLTKETSAWQSEYQQRYPFYDFSEYEKRMRAV
EYARSRKVKNDF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495