Gene
| Gene Model ID | pfu_aug2.0_1470.1_01648 |
|---|---|
| Locus | scaffold1470.1 : 54239 ... 56785 : - |
| To GenomeBrowser | scaffold1470.1:54239..56785 |
| Genes list of scaffold | scaffold1470.1 |
| Synonym | pfu_aug1.0_11624.1_68373 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1470.1_01648.t1 | 3 | 1 | VWA_2 | 4 | 60 | 2.5e-06 | 27.6 | 0.0057 | 11.0 | 6.1 |
| pfu_aug2.0_1470.1_01648.t1 | 2 | 1 | VWA | 4 | 18 | 8.6e-06 | 25.5 | 0.045 | 84.0 | 2.8 |
| pfu_aug2.0_1470.1_01648.t1 | 2 | 2 | VWA | 186 | 315 | 8.6e-06 | 25.5 | 1.6e-07 | 0.0003 | 20.5 |
| pfu_aug2.0_1470.1_01648.t1 | 3 | 2 | VWA_2 | 246 | 315 | 2.5e-06 | 27.6 | 1.4e-06 | 0.0027 | 17.8 |
| pfu_aug2.0_1470.1_01648.t1 | 3 | 3 | VWA_2 | 388 | 438 | 2.5e-06 | 27.6 | 0.97 | 1800.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1470.1_01648.t1 | gi|145503351|ref|XP_001437652.1| | hypothetical protein [Paramecium tetraurelia strain d4-2] | 0.0 |
| pfu_aug2.0_1470.1_01648.t1 | gi|67903906|ref|XP_682209.1| | hypothetical protein AN8940.2 [Aspergillus nidulans FGSC A4] | 0.0 |
| pfu_aug2.0_1470.1_01648.t1 | gi|115390308|ref|XP_001212659.1| | conserved hypothetical protein [Aspergillus terreus NIH2624] | 0.0 |
| pfu_aug2.0_1470.1_01648.t1 | gi|596697573|ref|XP_007281935.1| | hypothetical protein CGGC5_10489 [Colletotrichum gloeosporioides Nara gc5] | 0.0 |
| pfu_aug2.0_1470.1_01648.t1 | gi|302885971|ref|XP_003041876.1| | hypothetical protein NECHADRAFT_97479 [Nectria haematococca mpVI 77-13-4] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1470.1_01648.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1470.1_01648.t1 atgccaatagacattggaattttgcttgacgtttcgcgttcaatgaagaagagttacagagatattcctggaactgttgg tgaaccgtgggcaaagtcaatatttcagattataatggacttaattacatatgatttgttatccgaaaatagagtcttcg cccttgcgtttggaggtacgggtaaaaatgtagtatttgacattttgagaacactcgagaaattcaagagcgtaggtaac ggtgatgagttcggactccctgctaaagaagagaacatagaagagttcctatcttttctggaaaaacatggagtaagatc aattcgaagatgggttgaggtagaagtcattagaaaagtcgttgatgattacacattaaagctggctctaagcgaattga aatcaaatgaaactttcaggagaaattttattaatgatatgttacctgaaggtgcaaaagaatggattctagaactaaat aggcaagaacaacgggcaaatatatgttgctgcattgcccgtattacgcacaatatagttgcggcagtggcggcaaattt tagaaaggcaactaaggaagagataaaaaaaatagttgaggatgctagaccgaaattgttggaacatgctacttcacgat caattctcccggtccatgatgcgttacaaatcatcaataacggcattgaaattaaggaccttacatctgaaagaaccaat gcattatacagtgcagttaagcagtttgtttttggaaacaccccgctatgtagagcgttgaaaaggtcagctaaattgtt taaatcagaagaacaaagccagggattgagaaatctattatttgttctttccgatggaaagcccacggatgaaaaaagat ttgatgtcgatgcgatcaaaagagatcttgttaaacaaaatgtcaccgttgtgtcttgctatatatccagggaaacaata gaatcaaaaacactctatagcacaattaatcctgagtggagcgatggagcaaagtttctctttgatctgtgttccattgt gccgacacaaaggattccgcttgcaatccttgtgagacgtggatggcaaatcgatataaaaaacaatgaaactaaattat ttatgaaagtgaatcatcccgaaaatgttcgagaagcatgtgatttagcccagagcgttgtcttcaaccaagacgcgctt tcagatttacttgcctccgtttctctagatctttacatcaatcaaaacaatgatggactcacagcctccaaacaagaggg agctacgtgttacgctaatgcatgtgcaacagttcttcatttatcaatgaaacggatattaggacgtgaaaatggctatc ctgactttaatgagctacgacaagaattgattgaacgctatggacagagtggtgcaatacctatcaaagttctcgaagac atttgcccaaaataccgtcttaattgtagaaatgtcgacgaagagggagcaaagaaagctattacagagaaacgcccagt tgttgctgtgtaccgtcttacgaaaaaacaacggaacaagtttgatcgtttttacgcgaggaatcctactggagtattga ccaaaagaaacatagatatcacaaagaggaaatctggtcaaagattactgggacatgccgtagttcttacaagttttaac agccagggtctccgtcttatgaactcatggggagaatcttggggagatgtcggtttttttagggttcagtctgctgacgt gcttggtctgaaatttatagatgtgtactggaattcagatgatctttctgaaaatgaaaaagcgtattacaaagaacatg gtgctgaagttgctaatagactaatggaaaaatatataggtctacggaatcaaaattacgaatgtccattatgtgaaaga gaatcaccggttaatagctttgagggaacaatgcatcgtgcaaaatgtcctaaatgcaaaagaaagttttcaaacaacaa cgctggaaatttgcttgctctgaatatgtatctgacatcgttggctagataa |
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Protein
| Protein ID | pfu_aug2.0_1470.1_01648.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1470.1_01648.t1 MPIDIGILLDVSRSMKKSYRDIPGTVGEPWAKSIFQIIMDLITYDLLSENRVFALAFGGTGKNVVFDILRTLEKFKSVGN GDEFGLPAKEENIEEFLSFLEKHGVRSIRRWVEVEVIRKVVDDYTLKLALSELKSNETFRRNFINDMLPEGAKEWILELN RQEQRANICCCIARITHNIVAAVAANFRKATKEEIKKIVEDARPKLLEHATSRSILPVHDALQIINNGIEIKDLTSERTN ALYSAVKQFVFGNTPLCRALKRSAKLFKSEEQSQGLRNLLFVLSDGKPTDEKRFDVDAIKRDLVKQNVTVVSCYISRETI ESKTLYSTINPEWSDGAKFLFDLCSIVPTQRIPLAILVRRGWQIDIKNNETKLFMKVNHPENVREACDLAQSVVFNQDAL SDLLASVSLDLYINQNNDGLTASKQEGATCYANACATVLHLSMKRILGRENGYPDFNELRQELIERYGQSGAIPIKVLED ICPKYRLNCRNVDEEGAKKAITEKRPVVAVYRLTKKQRNKFDRFYARNPTGVLTKRNIDITKRKSGQRLLGHAVVLTSFN SQGLRLMNSWGESWGDVGFFRVQSADVLGLKFIDVYWNSDDLSENEKAYYKEHGAEVANRLMEKYIGLRNQNYECPLCER ESPVNSFEGTMHRAKCPKCKRKFSNNNAGNLLALNMYLTSLAR |
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