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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1371.1_05003
Locus scaffold1371.1 : 138267 ... 159135 : -
To GenomeBrowser scaffold1371.1:138267..159135
Genes list of scaffold scaffold1371.1
Synonym pfu_aug1.0_6188.1_16867

Manual annotation
Annotation by Blast2GO
Annotation GO
brother of tout-velu GO:0001888 GO:0005783 GO:0005794 GO:0006024 GO:0006044 GO:0007224 GO:0007367 GO:0008101 GO:0015014 GO:0016021 GO:0016055 GO:0042328

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1371.1_05003.t1 1 1 Glyco_transf_64 100 196 3.8e-28 98.2 3.7e-32 5.5e-28 97.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1371.1_05003.t1 gi|195335786|ref|XP_002034544.1| GM21933 [Drosophila sechellia] 0.0
pfu_aug2.0_1371.1_05003.t1 gi|17647209|ref|NP_523790.1| brother of tout-velu [Drosophila melanogaster] 0.0
pfu_aug2.0_1371.1_05003.t1 gi|195487235|ref|XP_002091823.1| GE12019 [Drosophila yakuba] 0.0
pfu_aug2.0_1371.1_05003.t1 gi|158301757|ref|XP_321405.4| AGAP001688-PA [Anopheles gambiae str. PEST] 0.0
pfu_aug2.0_1371.1_05003.t1 gi|676430372|ref|XP_009045904.1| hypothetical protein LOTGIDRAFT_137450 [Lottia gigantea] 0.0

Transcript
Transcript IDpfu_aug2.0_1371.1_05003.t1
Definition-
>pfu_aug2.0_1371.1_05003.t1
atgcttgccaacgatacagatacagagtcaaagaccgaggacgttctgggtccaattgaaccgccattcccctccatgaa
gttcaaacaaaattttacacagcatgtcagttatgagagtttttccaaagttcgatatccatttgaactgtttccttaca
caccttttgagaaggtgttaccattggaggcacaatataaagggtcagattatggctttcaacctattggaagaggcatg
ggaggtaccggcaaagagttcagcaagggtctaggaggaaaccttccgaaagaacagtttactattgtgatgctaacata
tgacagaaataagaaactgatcagtgctcttcagaaacttaaaggattgccctttttgaataaaatcatcgtagtgtgga
acaacccggcaccgccttctacaattttggaattgccagaaataggggtcccaattaaggtactgaaaatgtcaaagaat
agcttgaacaatcgtttcctgccattcgatattatagaaacagaagctgttctcagtattgatgatgatgtatatcttcg
acatgaagagattgtctttgcattcagacaagacgatgtgcttaaccttgatgtaacgtatcgcgacgaaaaaaaagaag
gggtaggggtaacaagaaatagcgctaacttgagaaaaccgggaaaacagggtgctctggaattagtgaacaggacggta
ggtgagcgatatcctcggggacatacagtccaccagcagcgataccagcctagtggttataacatgtataatgaaagttt
aacgagtgataaaactgaagaattatcggaaattgtaagcagtgacgcaccttaa

Protein
Protein IDpfu_aug2.0_1371.1_05003.t1
Definition-
>pfu_aug2.0_1371.1_05003.t1
MLANDTDTESKTEDVLGPIEPPFPSMKFKQNFTQHVSYESFSKVRYPFELFPYTPFEKVLPLEAQYKGSDYGFQPIGRGM
GGTGKEFSKGLGGNLPKEQFTIVMLTYDRNKKLISALQKLKGLPFLNKIIVVWNNPAPPSTILELPEIGVPIKVLKMSKN
SLNNRFLPFDIIETEAVLSIDDDVYLRHEEIVFAFRQDDVLNLDVTYRDEKKEGVGVTRNSANLRKPGKQGALELVNRTV
GERYPRGHTVHQQRYQPSGYNMYNESLTSDKTEELSEIVSSDAP

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