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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1371.1_05000
Locus scaffold1371.1 : 80626 ... 96917 : +
To GenomeBrowser scaffold1371.1:80626..96917
Genes list of scaffold scaffold1371.1
Synonym pfu_aug1.0_15.1_14686

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1371.1_05000.t1 1 1 Ig_2 313 393 8.9e-07 28.9 1.6e-09 2.6e-06 27.4

Transcript
Transcript IDpfu_aug2.0_1371.1_05000.t1
Definition-
>pfu_aug2.0_1371.1_05000.t1
atgattctctgcgtactgttgctgacttgtgtcgtgatattaacggaaggttcttcctctcacgagattgatatcctgtg
ggaaaagtatggtgacttgaaagcagaaatggaggagttaaaggcgaatttccgacatctggaggacagactcttaacga
ttgatatcctgtgggaaaagtatggtaacttgaaagcggaaatggaggagttaaaggcgaatttccgacatctggaggac
agactctcaacgccaatcaaattgcaagaaatttgccagaggcgggataaatacccgaaaggtgcatgtctggtccatgc
tgtaaaggaagaagagcttgattcaaatatcacagtttctggagacgtagtcacagggacaatcaacctttcaatgaaag
aaaaaggggatttcccatcatttatatgtggagacggagacaagttcgtgcaattagatctctctgcaccgcacacagat
cggaataaaactaacatagcaagatcctacagcgatgggcaatgtaaaatgagcattccaaaacacttggcaaatgctac
tcaccagatgatcaaggtcaacgcatcatgcgagcaactgcaactttccatgaacgcctctactatttttggttttaaca
ttaataaccatacttcggagtatctaccgtatggagagtacgggaataattacggcttttctcaacacagcgaaagtagc
cagggggtccttttaaccacattttcattcccacatagttcccatcttgggcctagtaatctgatcgccttcaccttgaa
cattcgtcatgacgaaagcagcccagtgaaatcctcgatgcttggtttttattattccaagtcattctacaatcatagcc
ctccgatacgggccggagatgttggaattaatctatcttcctgcaattctaaagagaaattacaaagaggcaaaaattgt
tctttgatatgtttggtgataggtaaccctgttccacagataacgctaacacacaatggcaaggaagtcaaaggagggaa
gttacctccgccgaatagtcccattttgaagaaatacgttaaccacttgattttaccgttggataatttggatgaaaacg
atgtcggcacgtatgaatgtagactaaggatggggaaccaaatcatcaaatcaacgaagaacttcactctctgtgacccg
atacctgttttcttttcttacgtctcaaataatacaatggtcaaggcaacagtgtactactatatggaggataataatac
cattgcatatatatcctgttatgactcaccaaaaatggagtggaaggacattctaggcaatgatgtgcgatatgatgatc
attacaacaaaatagtctactctgagacgataacaaatggctccatgtacagtgaaaactacttctgggcgcgcagaaga
aatgtacccataccgacaaatatatactgtaaaatagaagatacctgtgtcgaatggccaggaagagttgaaacctacac
gatgaaaatttaa

Protein
Protein IDpfu_aug2.0_1371.1_05000.t1
Definition-
>pfu_aug2.0_1371.1_05000.t1
MILCVLLLTCVVILTEGSSSHEIDILWEKYGDLKAEMEELKANFRHLEDRLLTIDILWEKYGNLKAEMEELKANFRHLED
RLSTPIKLQEICQRRDKYPKGACLVHAVKEEELDSNITVSGDVVTGTINLSMKEKGDFPSFICGDGDKFVQLDLSAPHTD
RNKTNIARSYSDGQCKMSIPKHLANATHQMIKVNASCEQLQLSMNASTIFGFNINNHTSEYLPYGEYGNNYGFSQHSESS
QGVLLTTFSFPHSSHLGPSNLIAFTLNIRHDESSPVKSSMLGFYYSKSFYNHSPPIRAGDVGINLSSCNSKEKLQRGKNC
SLICLVIGNPVPQITLTHNGKEVKGGKLPPPNSPILKKYVNHLILPLDNLDENDVGTYECRLRMGNQIIKSTKNFTLCDP
IPVFFSYVSNNTMVKATVYYYMEDNNTIAYISCYDSPKMEWKDILGNDVRYDDHYNKIVYSETITNGSMYSENYFWARRR
NVPIPTNIYCKIEDTCVEWPGRVETYTMKI

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