Gene
| Gene Model ID | pfu_aug2.0_1352.1_08334 |
|---|---|
| Locus | scaffold1352.1 : 89931 ... 97875 : - |
| To GenomeBrowser | scaffold1352.1:89931..97875 |
| Genes list of scaffold | scaffold1352.1 |
| Synonym | pfu_aug1.0_11701.1_24936 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vasopressin v1a receptor | GO:0004871 GO:0007165 GO:0008015 GO:0010033 GO:0016020 GO:0044057 GO:0044464 GO:0044703 GO:0048522 GO:0048609 GO:0051705 GO:0065008 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1352.1_08334.t1 | 1 | 1 | 7tm_1 | 49 | 357 | 2.0e-24 | 86.1 | 2.1e-28 | 3.1e-24 | 85.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1352.1_08334.t1 | gi|1276863|gb|AAC52507.1| | vasopressin V1a receptor [Rattus norvegicus] | 6.0e-13 |
| pfu_aug2.0_1352.1_08334.t1 | gi|434000|emb|CAA77748.1| | V1a arginine vasopressin receptor [Rattus norvegicus] | 1.0e-12 |
| pfu_aug2.0_1352.1_08334.t1 | gi|556991965|ref|XP_006000456.1| | PREDICTED: vasopressin V1b receptor [Latimeria chalumnae] | 2.0e-12 |
| pfu_aug2.0_1352.1_08334.t1 | gi|354477250|ref|XP_003500835.1| | PREDICTED: vasopressin V1a receptor [Cricetulus griseus] | 2.0e-12 |
| pfu_aug2.0_1352.1_08334.t1 | gi|589920723|ref|XP_006973397.1| | PREDICTED: vasopressin V1a receptor [Peromyscus maniculatus bairdii] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1352.1_08334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1352.1_08334.t1 atgacaacaagagtcttaacaagttcaaatatggagaactctacaaatctgacgtttacaaacgagtatctgaacaatta catggctgaaaagcgactactgcatacagttctactcagtattatcatttcgattggatgttatgggaatatgactgtga tcataatatttcattgtgtgaagacaaaatggagagcggaaaagtttttcattaatgcccttgcatggactgatctagta gccttaatccactcactgattgggatgtatatccagaatttttattctgtcttctatttggaagagtacacttgcaaact cacgttgtatttgtcagtgctgtcacaagaagtatccgtttatctccttgctgttatagcatacgacagatatcgtctgg tttgtaagccgtgtcgtctgaggttgaatataagacaaaagagaatagccgtggcagtttcctacattctagcggcgatc atctgttcccctgtgttgttctacagtggaactgatgagatttccattaacataggttctaaagaaacactggctatgcc atgcaggatttaccgatatatagaaataaggactttaatgtatatcggcttcgcttttcactttgttgcagtatgtctcg gaataatttgttacgtttttgttggaagaactttatttaagaaaactcgaagtaatgacgaacgaatcccatctcccaca acagaaacgaagggagtgacagtagatgatgccgatatcgattcccagggtacgatagattctaatgccacaacagatca aatcacatccttccctacatcgaaaagaaataataacgaacgggaagagaaaaactctccgtcgaaacgcattatcagat ataattttactttgatgtttatatccattttcattctcaatattaccgctagtacaatacagataattctgaggatggtt tcctacaaacaaagttacctgaattacaacgacaatgcctgggccttgagtgcattcactttattccagaggagtgggat ctttgttcatgcttttgaccctttcatttatgcttattttgatctccgaatcagggaagaggctatgctttcaggtttca aaaatgtgtttctacatataatggattatcagctcaaataa |
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Protein
| Protein ID | pfu_aug2.0_1352.1_08334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1352.1_08334.t1 MTTRVLTSSNMENSTNLTFTNEYLNNYMAEKRLLHTVLLSIIISIGCYGNMTVIIIFHCVKTKWRAEKFFINALAWTDLV ALIHSLIGMYIQNFYSVFYLEEYTCKLTLYLSVLSQEVSVYLLAVIAYDRYRLVCKPCRLRLNIRQKRIAVAVSYILAAI ICSPVLFYSGTDEISINIGSKETLAMPCRIYRYIEIRTLMYIGFAFHFVAVCLGIICYVFVGRTLFKKTRSNDERIPSPT TETKGVTVDDADIDSQGTIDSNATTDQITSFPTSKRNNNEREEKNSPSKRIIRYNFTLMFISIFILNITASTIQIILRMV SYKQSYLNYNDNAWALSAFTLFQRSGIFVHAFDPFIYAYFDLRIREEAMLSGFKNVFLHIMDYQLK |
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