Gene
| Gene Model ID | pfu_aug2.0_1352.1_08331 |
|---|---|
| Locus | scaffold1352.1 : 14216 ... 42107 : + |
| To GenomeBrowser | scaffold1352.1:14216..42107 |
| Genes list of scaffold | scaffold1352.1 |
| Synonym | pfu_aug1.0_6906.1_17009 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1352.1_08331.t1 | 1 | 1 | Fibrinogen_C | 44 | 226 | 0.0 | 156.9 | 0.0 | 1.4013e-45 | 156.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1352.1_08331.t1 | gi|260809646|ref|XP_002599616.1| | hypothetical protein BRAFLDRAFT_217757 [Branchiostoma floridae] | 9.99995e-41 |
| pfu_aug2.0_1352.1_08331.t1 | gi|260796611|ref|XP_002593298.1| | hypothetical protein BRAFLDRAFT_83845 [Branchiostoma floridae] | 4.00001e-40 |
| pfu_aug2.0_1352.1_08331.t1 | gi|115709990|ref|XP_794784.2| | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_1352.1_08331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1352.1_08331.t1 atgtgtagtctgacatgctatgagaactacatccagtcgtctgcctcaggcagcagtggtttgatgatctgtctttcttc aggaaaatggtctgttttggatccacagtgcaaagtttgtaaatggattcatgattgttccgatttgagggctataggct acaaaacgagtggagtgtacaatataattgtgaaggggaaggcgatggaggcatactgtgacatggagacagaaggcagg gggtggacagttgtaatgaaacgagttgatggatctctcaacttcaatcagaactggaataagtacaagtatggatttgg cagtgccagaggcgaatattggttgggcaatgagtacatccatacattgacgtggaaaagaagatacgaagcatacttca agatacagtcctgggagaaaatgtggtactgggcctggtacaatttgttctaccttgattccgagaataacggatacaag attaaattagggggatacaaaggaaatgctggacaatatctaaacatgggtatctcaggcggttctatacaagaccagct ttttacaacacttgacagagatcaggataagagtgagtataataaagccaaggcttatggaggtggatggtggtacaaac gctgggcacactgtgtactgacgggcagatatggatccgatgcgttcctgtggaaaagtatagggaagttgagagcatca accattatggtccgaccaaggcagtga |
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Protein
| Protein ID | pfu_aug2.0_1352.1_08331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1352.1_08331.t1 MCSLTCYENYIQSSASGSSGLMICLSSGKWSVLDPQCKVCKWIHDCSDLRAIGYKTSGVYNIIVKGKAMEAYCDMETEGR GWTVVMKRVDGSLNFNQNWNKYKYGFGSARGEYWLGNEYIHTLTWKRRYEAYFKIQSWEKMWYWAWYNLFYLDSENNGYK IKLGGYKGNAGQYLNMGISGGSIQDQLFTTLDRDQDKSEYNKAKAYGGGWWYKRWAHCVLTGRYGSDAFLWKSIGKLRAS TIMVRPRQ |
|