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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1340.1_01553
Locus scaffold1340.1 : 19542 ... 22415 : -
To GenomeBrowser scaffold1340.1:19542..22415
Genes list of scaffold scaffold1340.1
Synonym pfu_aug1.0_6438.1_45433

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1340.1_01553.t1 1 1 Mab-21 192 356 2.9e-29 102.1 1.3e-32 9.3e-29 100.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1340.1_01553.t1 gi|156356130|ref|XP_001623783.1| predicted protein [Nematostella vectensis] 3.0e-10

Transcript
Transcript IDpfu_aug2.0_1340.1_01553.t1
Definition-
>pfu_aug2.0_1340.1_01553.t1
atggtgacatttaatagattgttctgtgtacttgtggatttcttcttacataatggacagtctcacaaacctttgatgga
aaaaatattcaattatctttcaaattctggaggaaggagacccatgatgcaattacctgaggaattaagatatttgttag
aattaattccagatgaaatcttaaactatgcactagactacataaatacatcgttttcatatggacaaatggtcactttt
caaatgagtggaagttgtgttgagggctttgatttagatacgtctgattacgacttaatggctatagtcaaaatgttcac
ggtgcatgacccgactcaagaatacaacaccgatgatcaatctgttatcttgctctttaaagagaatacaagacctatgt
attctagactgtatctaccaaatatgcttaacccttcccaacggatccactgtacagagcaaatttacaacacattttat
acaaaacaaaatggaaaattatacctttcgagtagcaaaataagagcatttgtctgtgaaatgaatcactttaaggcaaa
taatcggtgcgttagtacacaagatggaaatgttgatcatgtcatagcgataccgtcatatacttggccatacgaagcag
caggatgcttgaatcgcattttaaggcatggatggccttcccttaatgtgattcgagatatggttcaggatggctgtctc
tttgtccctattggatgtaaaacatcaccgtatgaggatatagaatggcgtatgtcattttcactggctgaaaaacgttt
ggtgcactctatgaatcatactcaatttcttacctatgctcttctgaagatactgctgaaggaggttattgaggaagaat
cggatataaaaggtcttctttgctcgcactacatgaagactttagttttctgggaaataattgatacgaacattccatgg
atcccatctttacttcttcaacattcttggaattgcttccgtaggcttctttcttggataaagaatggatactgtccaaa
cttttttgtgccagaaaacaacatgttctttcccaggattcatggacgtgataaactgacgttgatgcatttcttatgca
gaatatatggtgatggatacttgatacttcttaaaataccctcttttcggaatggagtagaacgatgtggtaatattcca
agacaaactatgaatatcggagtgagaagatcagttatcatgaagaaattcatcaacttgtttggcgctcatataaagag
taactcgaatgaaatgtccgagggtctggagagtctacagtcagatctattttcggagttaagccacttcatgaacatgt
gtaatttaaacctatcatgcttcagaaaactatgcattcagggcagcaatatgcgcggtaacagaaaaagatatgagcaa
gaaaaaaccacgtttcgtatactcagggcttcttcaccagattgtgttcaaagtaacatattcctggcaatttatttcta
caaatgtaaacgatacgagacctgcgtttgcttgttgcataaattaatgaagaagataaatgacaaggaaataatttatt
cctgggctttcgatgtcaataaatatgcatctcttggtggtgacgttttttcagttatgagcggcatgcacaggtgcatt
gcttcgtatattcctctggattcagaaacatctattcctgagatttcagcggagtgcaagaaaacggaacatgatattaa
agaagttcaacttttttctccgttggtactgacgcactttcttctttttctatgccatttccgagatggctatatcacag
aggcttatgttcatttaacgaaccttaaatatgatttacaaaacgacaatgaatatcacatcccattctctactacacca
atatcatgggagatactaggggtatgtcaagaaattattggcgactatcagaatgctctggtatcctttgacaaatgtga
ggagtgtttgggtgttgaatttgaactacactcgcttcaatttataattcttcaaaatgtaattgaagaaagaaggagga
gaatatacgatcttctgagcaagagaggaacaaaacatagataa

Protein
Protein IDpfu_aug2.0_1340.1_01553.t1
Definition-
>pfu_aug2.0_1340.1_01553.t1
MVTFNRLFCVLVDFFLHNGQSHKPLMEKIFNYLSNSGGRRPMMQLPEELRYLLELIPDEILNYALDYINTSFSYGQMVTF
QMSGSCVEGFDLDTSDYDLMAIVKMFTVHDPTQEYNTDDQSVILLFKENTRPMYSRLYLPNMLNPSQRIHCTEQIYNTFY
TKQNGKLYLSSSKIRAFVCEMNHFKANNRCVSTQDGNVDHVIAIPSYTWPYEAAGCLNRILRHGWPSLNVIRDMVQDGCL
FVPIGCKTSPYEDIEWRMSFSLAEKRLVHSMNHTQFLTYALLKILLKEVIEEESDIKGLLCSHYMKTLVFWEIIDTNIPW
IPSLLLQHSWNCFRRLLSWIKNGYCPNFFVPENNMFFPRIHGRDKLTLMHFLCRIYGDGYLILLKIPSFRNGVERCGNIP
RQTMNIGVRRSVIMKKFINLFGAHIKSNSNEMSEGLESLQSDLFSELSHFMNMCNLNLSCFRKLCIQGSNMRGNRKRYEQ
EKTTFRILRASSPDCVQSNIFLAIYFYKCKRYETCVCLLHKLMKKINDKEIIYSWAFDVNKYASLGGDVFSVMSGMHRCI
ASYIPLDSETSIPEISAECKKTEHDIKEVQLFSPLVLTHFLLFLCHFRDGYITEAYVHLTNLKYDLQNDNEYHIPFSTTP
ISWEILGVCQEIIGDYQNALVSFDKCEECLGVEFELHSLQFIILQNVIEERRRRIYDLLSKRGTKHR

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