Gene
| Gene Model ID | pfu_aug2.0_1340.1_01552 |
|---|---|
| Locus | scaffold1340.1 : 4526 ... 17120 : + |
| To GenomeBrowser | scaffold1340.1:4526..17120 |
| Genes list of scaffold | scaffold1340.1 |
| Synonym | pfu_aug1.0_6438.1_45434 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1340.1_01552.t1 | 1 | 1 | FAM47 | 19 | 184 | 1.5e-13 | 50.6 | 4.2e-17 | 3.2e-13 | 49.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1340.1_01552.t1 | gi|676473686|ref|XP_009059899.1| | hypothetical protein LOTGIDRAFT_150620 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1340.1_01552.t1 | gi|390342058|ref|XP_003725580.1| | PREDICTED: protein FAM47E [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1340.1_01552.t1 | gi|291230066|ref|XP_002734990.1| | PREDICTED: protein FAM47E-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1340.1_01552.t1 | gi|524872060|ref|XP_005092797.1| | PREDICTED: protein FAM47E-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1340.1_01552.t1 | gi|699239209|ref|XP_002127250.2| | PREDICTED: protein FAM47E [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1340.1_01552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1340.1_01552.t1 atggctgagagaaaatatgatttagcattggtgaacaccaaaactgataaaagaatacgcgaaaaaccttggtataaaga aagattagatacaaaattcatcaagtccttgaagccctcagacacatcaaaaactcttgttgggaaaaactggatttttg taaaagatggtttagacgattttagagatggtttgcctcctctcacacagggtgacattctaataaagggtacaaaaggt cctggacctaatctcacaggaagtggagagaatgtttccgcagtcaaacagcctgcggtgcgtcgtcgcttcacgaagca ccagatatgttactcacgatcaactccactacaacaaagccgtcgagatcatattgacgagatagaatacagtctgatac agcatccgctagctctgtaccctcaccttgaagaggcagtcagtgcggagctgtttgaggacattgtggatatccttgac cccgagatgaaccttgaccccgatgaggagttagatgatcatttagaggaggaggatgaggaagaggaggagggaaagga ggaggaaagaccagaaacagccaagtctgacgctgaaaaaagtcaagactcaaatgaggaaggaaaaataagaaatccat acagatggcttcctagaaaggaggaacgagaaaagaaagacaaaagaaaaacgacagaaaaatcagcatcctctgaatct caggaggaacatattaagaaggtgactaaagagttctgtgactgggtcgcggagagcctcggaggtgaccaaaataaatt tgaggagtcgacgattatgagcttgtttgccagtggctacgagactaaaccggcactctctgtccctatccacgtggtgg agttgaccaatgtgccgcaagagttacggcaacaggccaccatcacacaacaacaggccaataaaaatttgccgcctcca gaacagaagaaaaatagctggaaatactcaggtcagtatgagcccagttgggtcaagttccaatatggtgcctggtatct agatccgaaatcgtggaccaaacgaaaggatgatgagccgctggaaaatccaaaagaaactaaagataaagaaatgtcag aggctaagaaaaagagcaaatctctgaatcatgtaatagctcagtcacagggggctaaattattcatggactgggttaat gaaccaaagagacagaatgatcccaagaaggaccacacaaaaccagagaattttagaaaagtgaattttttggatgaagt tgcagaaattcaggaacaggctctgattgaagaacagaagaaattaaaagctgaacaagatgccaagcagaggaaactct atctacggaagagacaagataccgaacaatccgtagcatga |
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Protein
| Protein ID | pfu_aug2.0_1340.1_01552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1340.1_01552.t1 MAERKYDLALVNTKTDKRIREKPWYKERLDTKFIKSLKPSDTSKTLVGKNWIFVKDGLDDFRDGLPPLTQGDILIKGTKG PGPNLTGSGENVSAVKQPAVRRRFTKHQICYSRSTPLQQSRRDHIDEIEYSLIQHPLALYPHLEEAVSAELFEDIVDILD PEMNLDPDEELDDHLEEEDEEEEEGKEEERPETAKSDAEKSQDSNEEGKIRNPYRWLPRKEEREKKDKRKTTEKSASSES QEEHIKKVTKEFCDWVAESLGGDQNKFEESTIMSLFASGYETKPALSVPIHVVELTNVPQELRQQATITQQQANKNLPPP EQKKNSWKYSGQYEPSWVKFQYGAWYLDPKSWTKRKDDEPLENPKETKDKEMSEAKKKSKSLNHVIAQSQGAKLFMDWVN EPKRQNDPKKDHTKPENFRKVNFLDEVAEIQEQALIEEQKKLKAEQDAKQRKLYLRKRQDTEQSVA |
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