Gene
| Gene Model ID | pfu_aug2.0_1325.1_18268 |
|---|---|
| Locus | scaffold1325.1 : 75596 ... 90515 : + |
| To GenomeBrowser | scaffold1325.1:75596..90515 |
| Genes list of scaffold | scaffold1325.1 |
| Synonym | pfu_aug1.0_4420.1_01723 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1325.1_18268.t1 | 2 | 1 | AA_permease_2 | 56 | 425 | 1.2e-37 | 129.5 | 3.89995e-41 | 1.2e-37 | 129.5 |
| pfu_aug2.0_1325.1_18268.t1 | 2 | 1 | AA_permease | 56 | 422 | 2.7e-33 | 115.0 | 9.3e-37 | 2.7e-33 | 115.0 |
| pfu_aug2.0_1325.1_18268.t1 | 3 | 1 | AA_permease_C | 381 | 399 | 3.5e-16 | 58.8 | 3.5 | 10000.0 | -3.6 |
| pfu_aug2.0_1325.1_18268.t1 | 2 | 2 | AA_permease | 540 | 591 | 2.7e-33 | 115.0 | 0.064 | 190.0 | 0.1 |
| pfu_aug2.0_1325.1_18268.t1 | 3 | 2 | AA_permease_C | 566 | 574 | 3.5e-16 | 58.8 | 4.9 | 14000.0 | -4.1 |
| pfu_aug2.0_1325.1_18268.t1 | 2 | 2 | AA_permease_2 | 569 | 619 | 1.2e-37 | 129.5 | 0.017 | 51.0 | 2.2 |
| pfu_aug2.0_1325.1_18268.t1 | 3 | 3 | AA_permease_C | 598 | 648 | 3.5e-16 | 58.8 | 1.2e-19 | 3.5e-16 | 58.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1325.1_18268.t1 | gi|291235215|ref|XP_002737540.1| | PREDICTED: high affinity cationic amino acid transporter 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1325.1_18268.t1 | gi|704589187|ref|XP_010190954.1| | PREDICTED: low affinity cationic amino acid transporter 2 isoform X1 [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_1325.1_18268.t1 | gi|291221499|ref|XP_002730760.1| | PREDICTED: probable cationic amino acid transporter [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1325.1_18268.t1 | gi|698387305|ref|XP_009819722.1| | PREDICTED: low affinity cationic amino acid transporter 2 isoform X1 [Gavia stellata] | 0.0 |
| pfu_aug2.0_1325.1_18268.t1 | gi|704589190|ref|XP_010190955.1| | PREDICTED: low affinity cationic amino acid transporter 2 isoform X2 [Mesitornis unicolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1325.1_18268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1325.1_18268.t1 atgcaccaaccgacgacagcggacttgatcaaaccaataaagatcagacaaaacaaattaaacaaacaagagcagggggc tttaggagaaatgttgtgtcggtcgctccaagagattcgagatgcaattgacgtaaaaggaaagagaaggatgaaagaat atggtgtcgggggatctataggattgggagtttttgctgtcttgcccttcgtgattcgaaatgaggctgggccatccacc gtgctatcaatctcctttgctgcccttggtgccatcttatcaggtctatgttactctgagctgacaacgaggattccgaa gtcgggatcgtcctatgtttacacatacagtacgcttggagagttgtgcggctttattgcaggatggaacatgttgatag aacatgttattggtgcatcaatcacagcaaaggcctggagccagtacacagatcatttatttaatggaaccgttcacagg ttctttgcgtttgatgcaaactgctcgacgggatttgctttgctttgtccggacgttcttggaatggcgccaattattct ggctgcgatactcattgcacttgacgtcaaggtaacttcagcgattgcaatcattttaacaacgctcagtgtgtttatga cgttttgcatcatctgtgtcggattcttccatgtaaaacatgaaaattggaccgatccaccagggttcttccctaatgga ttacaaggaactctctgcggaacatctctgctgttttatgtatttgctagtgctgacaggattgcttgtagttcagaaga aacaaaagaccctacgaaagttgttccaacgggaatatgctttaccctcgccatgacatccatattgcttttttgtgcat caattgcagttactttatgctttcccggaaacctctttcctgaatctgcggcactaccgatcatatttcgcaacagagga atagagggtgcggatagtttgataaccattggaggaatggtggcactgtttgttgcgtgtgtttgcactatgtactcaat agccagacttctgtatggaatctcttcagataatcttttcttccatccattcaagctcgtcaacgaattaactgggacgc caatttattcgataatatttgcatttctggtgtcaacagtggttatgctctctatgagtctcgaattgcttattcttatg aacagtgtatcaaccttgatatcaagcattctagtgagtatatgtgttatatgtctacggtatcaacaagatcagatagg gttgcgccaggagtatgaggaaccaagcattgaccaagcagtactatgcactgaattcgtatatgcttcctttctagcag atccaaagataaacaataacgaaacaccaatggagggaaaagaagataaatgttgccaacaaaattctctcatgtatggt tctatggaccaaaataattcattcaatcgcgcacctaggggaagtacttaccgcaaaatggacagtatgattaataatac acctaatgggagctctagtagcctgtttcctcttccgaccaatcacacaatagacccaacgcatgcaacatggatgaaag tcaattcctcattagtagcctatacagtggctagtgtgattttatcgctcatgatcgatctcaatctacgccagtgttgt tcatacggtccctcgtggtggcgagtcacgataatcattctatcaatagtgactctacttgtttcattcataatcatagc tcgtcaacctcagaatagagcaaaactaatatttaagacaccgtatgtaccggtagtgcctcttgtatccatattattca atgcaattcttctcgcaacaataccttatgaagcttgggtcagatttgcagttggtttatgcacaggtatagtcatctac attagttatggaatcagacacagcgaggagagaaaaatagacgagcaagaagttatattgtacgaaattacagagaactg a |
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Protein
| Protein ID | pfu_aug2.0_1325.1_18268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1325.1_18268.t1 MHQPTTADLIKPIKIRQNKLNKQEQGALGEMLCRSLQEIRDAIDVKGKRRMKEYGVGGSIGLGVFAVLPFVIRNEAGPST VLSISFAALGAILSGLCYSELTTRIPKSGSSYVYTYSTLGELCGFIAGWNMLIEHVIGASITAKAWSQYTDHLFNGTVHR FFAFDANCSTGFALLCPDVLGMAPIILAAILIALDVKVTSAIAIILTTLSVFMTFCIICVGFFHVKHENWTDPPGFFPNG LQGTLCGTSLLFYVFASADRIACSSEETKDPTKVVPTGICFTLAMTSILLFCASIAVTLCFPGNLFPESAALPIIFRNRG IEGADSLITIGGMVALFVACVCTMYSIARLLYGISSDNLFFHPFKLVNELTGTPIYSIIFAFLVSTVVMLSMSLELLILM NSVSTLISSILVSICVICLRYQQDQIGLRQEYEEPSIDQAVLCTEFVYASFLADPKINNNETPMEGKEDKCCQQNSLMYG SMDQNNSFNRAPRGSTYRKMDSMINNTPNGSSSSLFPLPTNHTIDPTHATWMKVNSSLVAYTVASVILSLMIDLNLRQCC SYGPSWWRVTIIILSIVTLLVSFIIIARQPQNRAKLIFKTPYVPVVPLVSILFNAILLATIPYEAWVRFAVGLCTGIVIY ISYGIRHSEERKIDEQEVILYEITEN |
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