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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1325.1_18266
Locus scaffold1325.1 : 1 ... 36815 : -
To GenomeBrowser scaffold1325.1:1..36815
Genes list of scaffold scaffold1325.1
Synonym pfu_aug1.0_4660.1_44995

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1325.1_18266.t1 1 1 RVT_1 273 389 1.1e-08 34.7 8.6e-12 2.6e-08 33.5
pfu_aug2.0_1325.1_18266.t1 2 1 Sulfotransfer_1 1301 1423 7.8e-27 94.1 7.3e-23 2.2e-19 69.7
pfu_aug2.0_1325.1_18266.t1 2 2 Sulfotransfer_1 1427 1477 7.8e-27 94.1 3.1e-08 9.3e-05 21.8
pfu_aug2.0_1325.1_18266.t1 1 1 BRE 1504 1595 5.2e-10 38.8 3.4e-13 1.0e-09 37.9

Transcript
Transcript IDpfu_aug2.0_1325.1_18266.t1
Definition-
>pfu_aug2.0_1325.1_18266.t1
atgtccaagaggagatccacagagtctccaagacggccagaaagtgaggtaactatgacttggtcagatcaggaactttc
agctaggcagcagacagattacgatagttcaggatcactggaaacgaacaactgtggagtccaagggcagataactcaga
ttcaaccacatgctgtacataagatgccatttgctactgatccagctgtatccagcttccaacatggacagataactcca
atgtccgcatccaacttccaacatgggcagataactccaacatcagtatccagcttccaacattggcagataactctaat
gtctgcatccaacttccaacatgggcagataactccaatgtctgtatccaactttcagcaggataaattaactccaaaat
tagacagtaaaaacacaacgcggaacaaagatcaccggactacacctgtaaggagaatcaaactagaaagaaacctgtgt
aaagacaagaaattgttgaccagtgatgccgaattaccaacacatttactgaaattatatgacgatgcaggacctacaag
ttctgatcatgagaagagagaaattgctcagttgcttttacgcaaccaacatgtattttcagagcatgagtttgaccttg
gatttactcctcttggggaacatgccattgatacaggtgtacacaaacctgtaaaacagcccccaagacgtgtaccacat
gctatggctaatgaagaaaaagagagcattgagaaacttgatgaacaaggaattattaagaaatccacttcaccattggc
ttcacctgtagttttagtgcgtaagaagtcaggtggtttacgagtgtgtatagattataggaaactcaatgctcttaccc
ttaaggatgcctttccactaccccgcattcaagattatcttgatgttgtttctggtgcttgcttgttttcaacttttgac
ctgacaagcggctatcaccaagtacctgtaaaacaaagtgatcaagctaaaactgcatttgtaacaaagtatgggctata
tgaatacacgtctatgcctttcagcttgacgaacgcgcctgtcacatttcaaagaatcatggaaatagcactaagtggtt
tacagtgggtaacatgtcttatctacttagatgatgtggtatgttttaatgaggtttgttttctgggccacattgtcaac
aaaaatggtgtgaaaccaaatcctgataacacagtgaagatacaaaattggccaacgcccaagactgttaccgaggttcg
ccaatttcttggaatggcttcttataaccgtcgctttgtgaaaaattttgcacaaattgcagcccctcttattaacctta
ccaggaagaatgtgagtttccattggacagatgagtgtcagaaatccataaagaaactgaaagagattttgacaggacca
gaaatcatggccttcccaaatgatactggtacatatatattgaatacagatgccagtaacaccagcattgggagtgttct
atcacagatacaaaatggacaggagcgtgtgattgctgatgcaagtagagccatgaacaagtccgagaaaaactactgtg
tgacagataaagaactcttggctgtacgttattttattgaatacttcaggcaatacttactaggacgaaaatttgttgta
cgtacagatcaccaggccatagtatggttatacaaattcaaggaaccaaaaggtcgaatcgcccgttggattgaaatcct
ctcttctttcaactttgttatggaatataggccatgcaacaagcattcaaatgctgattcactttctagatgtaagaatc
caactgattgtcaatgcccagagatagataatgaaggaagtctgaaatgtggaccatgtcccaagtgtaagagacgacta
gtaggggttcctgaacctacctttgttagacgacctcggaagactgatagttcatttgcaactaaggcagtaaaaaccag
gtctcatgtagaaaaagatgcaacattttggacaacaattagtggcaccgacgtaacaaaaatgcaaccgctacagaatg
aagacccggatattaaaccagtgtaccagtggaaactacaggaaactaaacccagtaaggctgaacttgccatgcaaagc
cctgctactagacactactgcttaatgtgggaatccctagaattacaaaataatgtattcgtgaaaattcaccctaacaa
ggaggggttgggagatgatacacagcttatcacacctaagaagcttcagcaagccattttgttctacaatcacgattcaa
tgatgtcgggtcacttaggagacaacagaacttggaagaaacccgtgccaaattttactggcagggaagtttgcctccca
gtagatatcatatttggtcaaccaaagcttcatgagaacaatatagtatcaaagggaagttacctccaagatctccgtga
aaagttgaataaagcccatgtaatagccaggaaacatctccagcagtctgcaaattaccacaagtgtcgctatgatcaaa
aggcgtccataacaccatatcacccaggtgattatatgttgtacctgcatgaagagagaaaagaaggggagagtagtaag
ctaaaaattccagctaaacgtggactactgtatagatgtctgccatgtggatacagaggggagagggccaggaccctgag
gcattatgtttcagaacatgtcatggtggattgtgtacctttcgcatgttccctgtgcaattgtaaagcatatgatgaag
ctggtattgcaaatcatctaggatggtaccaaaaacacttaaggattgccagaaaaaccaacccagaaagtccactcatt
gtagcgtgggagattgtgaagtctggcaccccttacgtcattaactttatgactgatgtagttgcttgcacccaagtgga
gagtacccttgcgtgggccattcggaagagggtgacggtccctgatgaagttattaaggcagtagtggaccatcgagaag
ttgtactttctcattccagtagaaacctcgttcagctgactcttgttgaagagccagtatcaactatgtctgttgtctgt
gaaagtatgtctgatcctgtccagtcttcgtgctgtattgtttcgtcaactgtatcgtcatgtgatgtctcaacccctgc
tgaatgtactgttacatctgttttaccaactgttgtatcgtccatcatttcacctgtgccatccaccattgtatcgtcca
gtgtgccagtaagcagtgccgtttcgtctcctgtaccgtcttgtgttccaggcgctgaaactattgtagaagatataaat
gaacaattattaccatctggagaggagaacgaaatggaagaagaagaagaagaaataataaaaccgaagaaaaagagaca
acgaagaaaatccacctcatcatcttcatcatcgtcatcatcatcatctgcagagacaacacctgaactattacagcaat
ttaaggaaatgtcagatagaataaggagtgccggttttgacacggcgtatgaaatgcgaaggattgaccagaagattaca
gaatcaaacctacttcttaaagagcaaaatagccttctgaaagaacttgacaacttactgaagagacaacagggaccacc
acgacgtgtaacacctgcccctatgcgcccgagcatccatccaaagattgaaatggatcaacagaatttctatagagagg
ggcacactgtacgcaaagatggcgaaatagaatttgaaatgttaacaattgacggtattgcactacctgagttcccacct
gctagacaacctgggggataccctaaaagactaaacgagattatcaaaatggatacacgaccggatgacattatacttgc
aacttatcctaaaaacggaacccactggatgagtgaaattttagatatgttagtaagagggagtgctgactattcaaagg
agaaattagtcaaacttatggaatctctacccgatatggagatgatctataaccttcagtcaccaagaatactaaacaca
catttaccctataaatggtttccacggaaacatattcagaatggaggaaaaatagtacactgtgcaagaaatccaaaaga
tacgtacgtttccttttatcatcattgctcagcaggaatggaacttggaccaaagacaaagggaatgacatggacacagt
ttttcgataactgtgttataggaaagggtaaagttgaaattttgatatacgatccagccaaggaaataaaagcccttgca
gccttccttgaacttaacgtttcggacgagctattaaaggacattacagataaatgtctattcgaaaacctcaaaaaagt
gtatgaagaagaaaaagaatatccacaggaaattcaaaagatgatccaaagacttagtgaaatgtcgccagattttaaac
atccaaacatattcagaaaagatcaactgagtttacgtgactgggatcacacggatccagcagcgttaaccagtgtagta
gaagagctgctgcagctctatagggactaccagctcagacagatagaagcttactccaggctgaccctgcagctcaactc
catgctagaggatcaaagtacgacaaaaatagatagccaggatgtggagatattcctatatatagcagagacaaagttag
gacctgttaatttcttgataaagttacctgtggattatacccaaattccagcttatgttaccaag

Protein
Protein IDpfu_aug2.0_1325.1_18266.t1
Definition-
>pfu_aug2.0_1325.1_18266.t1
MSKRRSTESPRRPESEVTMTWSDQELSARQQTDYDSSGSLETNNCGVQGQITQIQPHAVHKMPFATDPAVSSFQHGQITP
MSASNFQHGQITPTSVSSFQHWQITLMSASNFQHGQITPMSVSNFQQDKLTPKLDSKNTTRNKDHRTTPVRRIKLERNLC
KDKKLLTSDAELPTHLLKLYDDAGPTSSDHEKREIAQLLLRNQHVFSEHEFDLGFTPLGEHAIDTGVHKPVKQPPRRVPH
AMANEEKESIEKLDEQGIIKKSTSPLASPVVLVRKKSGGLRVCIDYRKLNALTLKDAFPLPRIQDYLDVVSGACLFSTFD
LTSGYHQVPVKQSDQAKTAFVTKYGLYEYTSMPFSLTNAPVTFQRIMEIALSGLQWVTCLIYLDDVVCFNEVCFLGHIVN
KNGVKPNPDNTVKIQNWPTPKTVTEVRQFLGMASYNRRFVKNFAQIAAPLINLTRKNVSFHWTDECQKSIKKLKEILTGP
EIMAFPNDTGTYILNTDASNTSIGSVLSQIQNGQERVIADASRAMNKSEKNYCVTDKELLAVRYFIEYFRQYLLGRKFVV
RTDHQAIVWLYKFKEPKGRIARWIEILSSFNFVMEYRPCNKHSNADSLSRCKNPTDCQCPEIDNEGSLKCGPCPKCKRRL
VGVPEPTFVRRPRKTDSSFATKAVKTRSHVEKDATFWTTISGTDVTKMQPLQNEDPDIKPVYQWKLQETKPSKAELAMQS
PATRHYCLMWESLELQNNVFVKIHPNKEGLGDDTQLITPKKLQQAILFYNHDSMMSGHLGDNRTWKKPVPNFTGREVCLP
VDIIFGQPKLHENNIVSKGSYLQDLREKLNKAHVIARKHLQQSANYHKCRYDQKASITPYHPGDYMLYLHEERKEGESSK
LKIPAKRGLLYRCLPCGYRGERARTLRHYVSEHVMVDCVPFACSLCNCKAYDEAGIANHLGWYQKHLRIARKTNPESPLI
VAWEIVKSGTPYVINFMTDVVACTQVESTLAWAIRKRVTVPDEVIKAVVDHREVVLSHSSRNLVQLTLVEEPVSTMSVVC
ESMSDPVQSSCCIVSSTVSSCDVSTPAECTVTSVLPTVVSSIISPVPSTIVSSSVPVSSAVSSPVPSCVPGAETIVEDIN
EQLLPSGEENEMEEEEEEIIKPKKKRQRRKSTSSSSSSSSSSSAETTPELLQQFKEMSDRIRSAGFDTAYEMRRIDQKIT
ESNLLLKEQNSLLKELDNLLKRQQGPPRRVTPAPMRPSIHPKIEMDQQNFYREGHTVRKDGEIEFEMLTIDGIALPEFPP
ARQPGGYPKRLNEIIKMDTRPDDIILATYPKNGTHWMSEILDMLVRGSADYSKEKLVKLMESLPDMEMIYNLQSPRILNT
HLPYKWFPRKHIQNGGKIVHCARNPKDTYVSFYHHCSAGMELGPKTKGMTWTQFFDNCVIGKGKVEILIYDPAKEIKALA
AFLELNVSDELLKDITDKCLFENLKKVYEEEKEYPQEIQKMIQRLSEMSPDFKHPNIFRKDQLSLRDWDHTDPAALTSVV
EELLQLYRDYQLRQIEAYSRLTLQLNSMLEDQSTTKIDSQDVEIFLYIAETKLGPVNFLIKLPVDYTQIPAYVTK

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Okinawa Institute of Science and Technology
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