Gene
| Gene Model ID | pfu_aug2.0_130.1_00296 |
|---|---|
| Locus | scaffold130.1 : 356733 ... 361692 : + |
| To GenomeBrowser | scaffold130.1:356733..361692 |
| Genes list of scaffold | scaffold130.1 |
| Synonym | pfu_aug1.0_10474.1_31930 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_130.1_00296.t1 | 1 | 1 | Ets | 277 | 345 | 7.2e-16 | 58.1 | 1.2e-19 | 1.8e-15 | 56.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_130.1_00296.t1 | gi|512833122|ref|XP_002937335.2| | PREDICTED: ETS homologous factor [Xenopus (Silurana) tropicalis] | 5.0e-16 |
| pfu_aug2.0_130.1_00296.t1 | gi|312098688|ref|XP_003149132.1| | hypothetical protein LOAG_13578 [Loa loa] | 8.0e-15 |
| pfu_aug2.0_130.1_00296.t1 | gi|663242676|ref|XP_008496902.1| | PREDICTED: ETS homologous factor isoform X2 [Calypte anna] | 3.0e-14 |
| pfu_aug2.0_130.1_00296.t1 | gi|548417627|ref|XP_005742057.1| | PREDICTED: ETS-related transcription factor Elf-1-like isoform X1 [Pundamilia nyererei] | 5.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_130.1_00296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00296.t1 atggcattagttcagaattgcaatccaccttgctaccaggaaaatgatatagaccactggttgatgcaacatccccgtgg tgtatgtatcgacgaagtcttagactggattgatggacctgaggcattctccacaaataaatatgctgaacttaaatcat ggaatctgaaggagaccgtgacgaattggaaagaagatggaacatgcgcgaagtactctcagcaagggacctgtaactcc acatcagatgacgaaaattacacagtcacagacatttcatggttctgtgagcggtacaacgaagaggtagaaatctcaaa aaatgaagaaaatctcattccacacactgtcacggagaaaatgttgttggaagaggattccaatttatcatcatcatcgt cttcgtcgtcattggcatattcttcattatcatcatcttcatcagatcagatttgttcccctttcaaagatacacttatt ttgcctacctcacaagctacgatctcaacatatgacaaaatcacgatgcaaacatcggcatcatcatcatcattaatttc atcgcatgaaaacgtgtcctggatgcaagaggatttcacttcatcgtctacgtcatctctttcctctgattcatcgttac caccaataacagcagctaagataaggggtcatctaatgtcttcatcgaaggatataaatcagcggcggttccaagaatct tgtactagaaataaggaggtcgggaaagcaaaatcaaagctttcacagaagacccgaaaaccacgagccaaacgtgggag aataccaggacagagatcgaatacgaaacatctgtgtgattttatgaagactttgttgaacgatccatccaccaatccta gtcttgtacgatgggaagacgagccttccagagtgttcagtattatacaatctaaaatggtggcacaaatgtggggaact tttaagaataattcaaaaatgaattatgaaaacttcggcagagcaatgaggtactgtagaaaagtgggagactttgacaa tgtgccagatcgatttaaagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnngaagaagaaaaaactgattttcaaatttggacccagagcaacatag |
|
Protein
| Protein ID | pfu_aug2.0_130.1_00296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00296.t1 MALVQNCNPPCYQENDIDHWLMQHPRGVCIDEVLDWIDGPEAFSTNKYAELKSWNLKETVTNWKEDGTCAKYSQQGTCNS TSDDENYTVTDISWFCERYNEEVEISKNEENLIPHTVTEKMLLEEDSNLSSSSSSSSLAYSSLSSSSSDQICSPFKDTLI LPTSQATISTYDKITMQTSASSSSLISSHENVSWMQEDFTSSSTSSLSSDSSLPPITAAKIRGHLMSSSKDINQRRFQES CTRNKEVGKAKSKLSQKTRKPRAKRGRIPGQRSNTKHLCDFMKTLLNDPSTNPSLVRWEDEPSRVFSIIQSKMVAQMWGT FKNNSKMNYENFGRAMRYCRKVGDFDNVPDRFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXKKKKLIFKFGPRAT |
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