Gene
| Gene Model ID | pfu_aug2.0_1298.1_28193 |
|---|---|
| Locus | scaffold1298.1 : 145176 ... 160150 : + |
| To GenomeBrowser | scaffold1298.1:145176..160150 |
| Genes list of scaffold | scaffold1298.1 |
| Synonym | pfu_aug1.0_1004.1_15307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1298.1_28193.t1 | 1 | 1 | TatD_DNase | 1446 | 1648 | 2.5e-23 | 82.6 | 1.2e-26 | 4.3e-23 | 81.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1298.1_28193.t1 | gi|676426991|ref|XP_009044802.1| | hypothetical protein LOTGIDRAFT_170716 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1298.1_28193.t1 | gi|524915587|ref|XP_005112587.1| | PREDICTED: zinc finger CCCH-type with G patch domain-containing protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1298.1_28193.t1 | gi|694663033|ref|XP_009486449.1| | PREDICTED: zinc finger CCCH-type with G patch domain-containing protein isoform X4 [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_1298.1_28193.t1 | gi|704464917|ref|XP_010085369.1| | PREDICTED: zinc finger CCCH-type with G patch domain-containing protein isoform X1 [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_1298.1_28193.t1 | gi|224078305|ref|XP_002197618.1| | PREDICTED: zinc finger CCCH-type with G patch domain-containing protein [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1298.1_28193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28193.t1 atgattttcaggatcaagctgagtcaagttgagcagacacttcaggcagccggagagacggctgatcttctacagctcag agatgagatgaaacagcttatatctcttacagaagatggcttggtatccctgatgaagagtaagatgttgacggagatag atggtggacaaacaacctcacattcagcaggcagatcaagtcacttagaggatgaatatgctgcttttcaggcatctatt ggggacggtcaagaaaaatcagatgacggagctcaagatggcagttctacctctcagtccattgtcgatcaactacagaa cattgtaggaatgaagtgccgagctccgttccttcacgagtggggttctaagggttacttcaatgccattgtaacgggtg tagaggaaacacagagttcagacgaagttcccaaagtcactgtgatgtattgtaatccgacctccaccaagatgctgcca tgttcttttcacctggagggaagatgtaattttgacagggaatggtgtaaatactcgcacggaaatgtggtggacgtgga ggatttgaaggaatttaaagaaccaaattataattatcttcagatgggtatgccgtgtttagtacggtatgatgatgacc tatggtacagggctaaagtagtggatatactggacgaccataagtttaccgtaaattttgacaactataacgacaccagg accgtggatttggaagagattctacctctcgatgcctcaaataacgaatcagatgagaatagtgatgacgatgatgatta tgctgacagaaatcagccaatcgacagaggccctgaagaagaaggggaggagcttcctgtgtatctatggaaaccaccta aaactaatgaagctcttggaagctgggaggctcatacaaggaaaaagaagtctattgattttgggaatcatcagaatttg gtttacctgagacaccccagttttatggaaatccacatggatcagcatctgcacaaaatacagnggggaatgccatcttc acatttacactttgatgcttcaagtcgtccttctgttgcccatcaccaaaatgtgaaaatacccgattttacacaagatg accacatgatgcagacaagtacattcgctattggcaatcaaatagggagaagacaagcattgttacctacaccagatatt actgttgccagtggtaccaatgataccaagagccaaaatcctaatcctcaatcagctagagctgcatctcaattaggaag aattgcatatcatgcttctaatgatggaaacagtgccacttattcgaaagatcagtatctccatggagcaccttccgtgt tacctactccaaaattgaatgttaccgatggattcagtaatcctaagagtcaaaattctagtcctcacttagctaaaact acatctcatgcttctaataacagtgccaataattcaaaagatcagtatcgctatggtcaacccactgtgttacctactcc aaaaatgaatgtttctgatgtcagcagtaatcctaagagtcaaaatccaagtcctcactcagctagaactacatctaatg cttctaataatggggaaaatgccactaattcaaaggatcagtatcgctattctgcacctactgcacttccagagtcagct agagtatggataaatcctaatttacagaagcagacaccaaaacctgcatcaatacatgaaagcatttggaaaaaatacag cagaaagaggaaacctggaccttttgacgtgactaaccctttgaaaagaaaaattcctgaatcaggccaaggtaatgata catcagatactcagaactctgaaaagtcctttgaagaaaaccctgatgcagatgcacaggatgcatcagtgccaaagaaa aagagacgcagacctaaaaacccatacagccgaggtctgcattcaaaatggactccaaaaacggcaagtaagttccagag ttgtccttttccgacttgcaacattcagagcaggagaatgaaatggcatgttggaattgaacacttgaatccagcctttg acaggattgatgcgtatcaaaatccacgccatcatattgctcgcagagatgggttggagtggcttgctaagaaaatcttg ggtcccaaagctagcattaacgatcttgttcctcttttgaaccggtctaacatcatacataacaatagtgtgctgtctga taaggatatcgcaaacatggagtccatgtgcagggcaatgaattgggagagaccacctgcgtttacactacatcccatca actcccccagcgtactcttgttctggcgctgtctgctcaatctggccatgatgttaaaaccagaggatcatcagctgttc atgaaagaaactacgacaaacctgcttaaatggtactattcagaaaattcaactgcagaagcaaaagatgtggttaacag accagtatctgtagagcagaaagcaagcacaacatcgtcacaaccaaactttgctttattaggaagaaatgatataaact caagactggaaaatataaggaagctaattgctcagcatgctgatgttgataaggtgcagatacctaactttaaaagtatt ggagctgtaggtcagcagaaatcacctgacattaagagcagtactacattaggacccaggaaggcatccgactttcatag tccagcaaattcaggtaaccagacattgcctgatgttaacagaagtgtacctgtaggttaccaaaggacacccaattttc agagtgttgcaagttcaggtaacgatacgatgcatggtaataagagtaatttagcatcagatagcccaaagacacccagt attcaaagtattacaacctcgggtaaacatacattgcttgacattcagagaaatgaagctgtaggtagacaaagggcccc caactttcagagtgttgcaagtcaaggtaacaaaaggatgacagacgttagaaggaatgttgctgtaagtaaccaaatga caactgattttcagagggttcccagcttagataaacaaagagcatcagactttcagagtattgcagcatcaggaaaccga aaagcaactgaccctaacactattgcagccttcagtaataaccaagggacacctgactttcagtgtatgtcagcttcagg tatcaaaaagacaccagactctacaagttcagatgcttttaggagcaaccagcatacacatgactccatgcattttacag ccttctgtagcaaccagcagatccctgattccagaagttttgtagccttcagtagcaaccagcagatccctgattccatg agtgttgcagcatttggtagcaaccaggagacacctgactttcagagtattgcagccttaggtgacaaaatgtcaccaag ctccgcgagttctgcagccttcagtgacaaccaacatagtcctgattccatgaattttaccgcctttggtagcatccagc agagtcctgactctcagaatattcaacttttcagcaaccagccgacaactgatgctaagaatattcaacagttcagtagg catgaacaggcgtatgcctttatgagaagagtccaagcccttaacagaaaccagagggcaccaggcccaaagaagaatgc tgctcaaaatagcaaccagcagatgcaagaatttaagaaagatggatccttgtatagcaaccagtcgccaccagaattta agaggatggaaccattaattagtctgcaacaatcaccagacttgatgaggactccagcattgagaggaaatccggagata cctacatttgagagaattgcagcatcaaacagtacccaacagtcacatgacttgaaaggggttgcagtctcaagcaacca acagacatctgactttaaaagtacagccgcccaaagtaaccaaaacagtgaagtgtccagtactcaagggcctccagaag aaatgatgtcttctttgggtggatggagagatggtagtgacagaaagaatacagcaagtgggcatcagaaagcagccgtc gcatctatgtcaagtattcttctagaaaatgtggactgtgtgtttgactcatatttaaatgttgaggaaatgtgtcagat attgttcaagaggaaaagttggtcatttgggagacaacctttgaagacaatttttaaaactaggataatgagagaggttg aaccaaaacatacagtggctgtagtaggaggagtaatgatctttgatgacccgagttcctatccgaaaaagtctcacgtt gaccctacgtggaatgtggcgtttggcgtacatccaagacatgctccatttcttacggaggagcagttaagtagactcgc caaaattttgcaagggagagaggttcgggcactgggaacgataggattcgactatactgagcagaagacgtactgggatt tccaagaggaggttttcgttaatcttctaggacttagtgaacctgacagaccaataataattcatgtaaaaggcgtggaa ggtgatgtgcttggatccagtgttcatcagaaatgcttcactaaagtgaaagaaaaatgttcaaaggaacagaaaattca attgcattcatattctggaactgccgaagatgtcggaatttggacgacagaatttcctaattgctactttggtttcacgt ggaatgttgaactctttaacgagattcagaagagtgctatcaggagtgtgccacgtgacaaaatcttgatcgagactgga attttggaccggtctgcctcattaccgaggactgcgatcaagagacccactcaacttggtgatctcgctgctttgattgc tgagataaggggagaaaagttcgatgaattcttgaagcaaaccgtagaaaatggacaacgcctacacgggacgagaatag tcaagaaaaaatcacgatga |
|
Protein
| Protein ID | pfu_aug2.0_1298.1_28193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28193.t1 MIFRIKLSQVEQTLQAAGETADLLQLRDEMKQLISLTEDGLVSLMKSKMLTEIDGGQTTSHSAGRSSHLEDEYAAFQASI GDGQEKSDDGAQDGSSTSQSIVDQLQNIVGMKCRAPFLHEWGSKGYFNAIVTGVEETQSSDEVPKVTVMYCNPTSTKMLP CSFHLEGRCNFDREWCKYSHGNVVDVEDLKEFKEPNYNYLQMGMPCLVRYDDDLWYRAKVVDILDDHKFTVNFDNYNDTR TVDLEEILPLDASNNESDENSDDDDDYADRNQPIDRGPEEEGEELPVYLWKPPKTNEALGSWEAHTRKKKSIDFGNHQNL VYLRHPSFMEIHMDQHLHKIQXGMPSSHLHFDASSRPSVAHHQNVKIPDFTQDDHMMQTSTFAIGNQIGRRQALLPTPDI TVASGTNDTKSQNPNPQSARAASQLGRIAYHASNDGNSATYSKDQYLHGAPSVLPTPKLNVTDGFSNPKSQNSSPHLAKT TSHASNNSANNSKDQYRYGQPTVLPTPKMNVSDVSSNPKSQNPSPHSARTTSNASNNGENATNSKDQYRYSAPTALPESA RVWINPNLQKQTPKPASIHESIWKKYSRKRKPGPFDVTNPLKRKIPESGQGNDTSDTQNSEKSFEENPDADAQDASVPKK KRRRPKNPYSRGLHSKWTPKTASKFQSCPFPTCNIQSRRMKWHVGIEHLNPAFDRIDAYQNPRHHIARRDGLEWLAKKIL GPKASINDLVPLLNRSNIIHNNSVLSDKDIANMESMCRAMNWERPPAFTLHPINSPSVLLFWRCLLNLAMMLKPEDHQLF MKETTTNLLKWYYSENSTAEAKDVVNRPVSVEQKASTTSSQPNFALLGRNDINSRLENIRKLIAQHADVDKVQIPNFKSI GAVGQQKSPDIKSSTTLGPRKASDFHSPANSGNQTLPDVNRSVPVGYQRTPNFQSVASSGNDTMHGNKSNLASDSPKTPS IQSITTSGKHTLLDIQRNEAVGRQRAPNFQSVASQGNKRMTDVRRNVAVSNQMTTDFQRVPSLDKQRASDFQSIAASGNR KATDPNTIAAFSNNQGTPDFQCMSASGIKKTPDSTSSDAFRSNQHTHDSMHFTAFCSNQQIPDSRSFVAFSSNQQIPDSM SVAAFGSNQETPDFQSIAALGDKMSPSSASSAAFSDNQHSPDSMNFTAFGSIQQSPDSQNIQLFSNQPTTDAKNIQQFSR HEQAYAFMRRVQALNRNQRAPGPKKNAAQNSNQQMQEFKKDGSLYSNQSPPEFKRMEPLISLQQSPDLMRTPALRGNPEI PTFERIAASNSTQQSHDLKGVAVSSNQQTSDFKSTAAQSNQNSEVSSTQGPPEEMMSSLGGWRDGSDRKNTASGHQKAAV ASMSSILLENVDCVFDSYLNVEEMCQILFKRKSWSFGRQPLKTIFKTRIMREVEPKHTVAVVGGVMIFDDPSSYPKKSHV DPTWNVAFGVHPRHAPFLTEEQLSRLAKILQGREVRALGTIGFDYTEQKTYWDFQEEVFVNLLGLSEPDRPIIIHVKGVE GDVLGSSVHQKCFTKVKEKCSKEQKIQLHSYSGTAEDVGIWTTEFPNCYFGFTWNVELFNEIQKSAIRSVPRDKILIETG ILDRSASLPRTAIKRPTQLGDLAALIAEIRGEKFDEFLKQTVENGQRLHGTRIVKKKSR |
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