Gene
| Gene Model ID | pfu_aug2.0_1298.1_28188 |
|---|---|
| Locus | scaffold1298.1 : 9417 ... 68455 : - |
| To GenomeBrowser | scaffold1298.1:9417..68455 |
| Genes list of scaffold | scaffold1298.1 |
| Synonym | pfu_aug1.0_29545.1_69924 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1298.1_28188.t1 | 3 | 1 | ABC2_membrane_3 | 4 | 271 | 1.8e-36 | 125.9 | 1.6e-39 | 3.5e-36 | 124.9 |
| pfu_aug2.0_1298.1_28188.t1 | 1 | 1 | ABC_tran | 335 | 472 | 5.6e-20 | 72.0 | 6.1e-23 | 1.3e-19 | 70.8 |
| pfu_aug2.0_1298.1_28188.t1 | 3 | 2 | ABC2_membrane_3 | 912 | 927 | 1.8e-36 | 125.9 | 0.2 | 430.0 | -0.3 |
| pfu_aug2.0_1298.1_28188.t1 | 3 | 1 | Y_phosphatase | 1084 | 1163 | 0.0 | 325.0 | 4.6e-32 | 9.8e-29 | 100.3 |
| pfu_aug2.0_1298.1_28188.t1 | 3 | 2 | Y_phosphatase | 1161 | 1266 | 0.0 | 325.0 | 1.4e-34 | 2.9e-31 | 108.6 |
| pfu_aug2.0_1298.1_28188.t1 | 3 | 3 | ABC2_membrane_3 | 1281 | 1386 | 1.8e-36 | 125.9 | 0.014 | 29.0 | 3.5 |
| pfu_aug2.0_1298.1_28188.t1 | 3 | 3 | Y_phosphatase | 1378 | 1606 | 0.0 | 325.0 | 1.4e-36 | 2.9e-33 | 115.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1298.1_28188.t1 | gi|260810768|ref|XP_002600120.1| | hypothetical protein BRAFLDRAFT_118238 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1298.1_28188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28188.t1 atgccagtctatctgaacactctcaacaatgctatacttagagctaaccttgaccctgccacgaaaggaaaccctgccgc ctatggaatcactgccacaaatcatcccatgaaagaaacaaacaatcagctgaatgaagattacattctccaaggttctg atgtactcatctctatcttcatcatcgtggccatgtcgtttgtgccggccagttttgtcgtcttcctcgtgtatgagagg tcgatcaaatccaagcacctacagtttgtgagtggcatcgatccagtcatgtactggttagccaactatgtatgggatat ttgtaattacatcataccagctttgtgtattattataatactgttgatcttccaaataccgtcatactcctcaccacaga acatgccggcagtcgtctctctcttcttactgtatggatggtcaataaccccagtgatgtacccagcctctttctggttc aaggagcccagcgccgcctacattagccttatcgtcgttaacctatttaccggcatcacgtgtatcgtatcaagcttcct gttagagattttctcgtatgaccatgaccttaagaaggtcaatgacatcataaaagatgtgttcctgatgtttcccaact actgccttggacgagggttgatggatatagcttacaatgaatacaggaatgaattttattataaaactggtcagtacgac aaagtacacagtccgtttacttgggatttgacaggaaagaagctggtagccatgacagttatgggattgtgtttcttcct aatcactctgctgtgtgaattcaaattcttccttaaaaggagactttcccataatccctcattaccagtttatgatgagg acatagatgtggctggagagaggaagagagtcctcagaggttctggaaggaatgacctgctgaggatacagaacctcaca aaagtatataagacgaggaagctaggaaaacacttagcagtggacaagttatgtcttggtgtccctacaggagagtgctt tggattgttgggtgtaaacggagcaggaaagacaactacgtttaaaatgctaacaggggatatcctacccagctctggaa acgcttacttaaatagattcagtatagttaaggacatgctgaaggtccagcagaatataggatactgtcctcagtttgac gcgctgtatgatgagcttacagcgagggaacatatacaactgtatgctaggctcaggggagtaccacctagagaagaaaa acaggttgtagagtgggctttaaccaaactaggcctgaccaagtatgccgacaaaccatcggggacgtacagcgggggaa acaagaggaaactatccactgctatagccttagtgggacatccacctcttatatttatgatgtttgaccgaggttcgaag cttggttgtccgaggatgagcccaccaccggcatggatccacattccaggcgcttcctctgggatctcatacttgatctc gtcaaaaatggccgctccgtcattctcacttcacatagctgaaaattcgaacaaagactttgaactatcaatggttcatg atctgaaagataatgtgaacctagccctgaacaggtctacggacatgtcctctatctccttccatacatttccccacacc tcggaccgagctgtggatggtaataacgacaccaacatactgaacggccactgtatccatacccgggaagctcaaacaac agtatggtggcgcgttcggctcacctctcaatccacaatacaaaggatctatatcgtgtacagaaatggattcagtgaca ggttagctgggtattcccttttcgtcacggatgaagaaatacgttcggaccagttcttccagggccaaaatcagcccctt ttccgtgacacaggcccaaacttaccaagtaccctgcagaatctacaactaactcctccagttgtggggcaagtggtcac catatacaacaaccggtctgtgcttccgtttccagcaggttattcttcagatgccttattggagctgtgtgaagttgaag tgtttgaatatctgtgcaacggggacactacttctcatggcgtggcagacgacttctacattacggcgtggttcgcctct atagttctcggaaacgttgatttcactctcaaagtcgagaagcttgtattcctggaacatttggaccaagctgcagatac atttgctattgccgaactggaacttgtaacagacaaacagggatctgcaacacacccggatgccgagctggatggtttgg ttctaactgctcattacgtaagttcaaatattttaaaatctggacaagtttctactggactatggttcttctatcctagt cttgcgtgtacaccggggacctatggaccagactgtacagagacgtgcgggggatgttctggtggtgcaccttgtgattc caaaaacggaacatgttacggagcatgcgcagacggttacttcggagacgattgtaaattaatatgccgtcctgggttct acggatttaactgtagtatgacatgcggtaactgctacaggaaccgcccatgtcaccatggaaccgggcgttgtaatgct cagtcggggccgatctgtcaggccggattccgtggagggatgtgtacaacaacacttattgagggtcagtcatcggcggt tacagcagttctggtcgttctttcactcttgttagtcgtaggcctggtcattgttttcatcattctatggagaagataca cactttctggaatgaaggatcaagctactaaggttgcccggcaggtctattcgtctttcaagtcggtacgtgatcggaga ccaacattaaactccataagatcgacaaaatctaccacggcccctgcagcacaaccacatccagacacagacagaggaaa agaggacgtaaccatcaatataaatgacagaatcccaattgtttgtgaggctggagccgaggaaaccgaggaaccagagg aagaggttactcagaagataggggacaaggcaactgtatatactaacagtgttaactacaccaacgtcgtcctcggtgat attgccgtggaggaacttcctcggattatactacagaaatctgaaaatgaaaacgaagaatttgacgaagaatataaggg tataccatatggtcaacatggacaatgtgttgctgctaagaagtcggaaaatataaagaaaaacagattcaaagccatat atccatatgataattcaagagtgatactcaagggacaatcatctgattacatcaacgcaagcttcatagatggaaatgga aaggcgaatgcttacatagcttcacaaggtccgaaacctgacacggttgacgatttctggactatgatttggcaggaaga tgtggcaacaatcgtgatgctgacgaatctgagagagtcgggaaaggaagatgaggaacgtcaggtagtccagtatcact acacaagctggccagatcacggtgtaccagaggcattaggattgcagcagttccatcaggttgtgatgaaaaacacatca aagtcccagggaccattactagtgcattgcagtgcaggcatcggaaggacgggtacatacattggtttagacgtccttct cagacaaggtcaagatacagggtttatcaacgtcagtaattatgtggcactgatgcgagaacaaagaatgaatatggtac agactctggaccagtacatctttcttcataccgttctgcgtgaagggtttcgccatgtagatgaaagcatacctaaatca caattcgtaacaagataccagacgatgaccgaggcccagcagccgacaaacatgtcaacactgaggaaacaatttcagga ccagtacatctttcttcataccgttctgcgtgaagggtttcgccatgtagatgaaagcatacctaaatcacaattcgtaa caagataccagacgatgaccgaggcccagcagccgacaaacatgtcaacactgaggaaacaatttcaggacctggaatcc tgcaggccacaatatggtgaaaaggactataaaagcgcaatgctccccacaaacaaatcaaagaacaggacatcggaggc tttaccagtggaacagttccgaccccagctcacatcgaaatccgagggacataatgactacattaatgctgtgcagatct cgacgtacacagagggtgaggctatgtttgtgacgaggtcccccttacctaatacagtagtggattgttggagactgatt acggactatgaaatagacactgtcataatccagggatcaaccgacaacaatgatgatttttgcacctggataccccctgt tgatgaatctaaatcgtgcagttctttcgacatatcaaaatcaaacgaggagaaacagaaagacggtctcagaacgtcca ttctgaatatactatccgaggacacctccttaaaagtcaaactgatagagatggtaccgtgggaccccgcctttcccgtc cctcccagtccggcctgtgtactgagggcagttcaactcacaagactctggaggcatactaatggcacgggaccaatact gtttatcagcccagacggagttaagggttgtggaatttttagtgtaatctacaactccgtggagcagatattggaggatg atgaagtggatatttacaacattgtaaagcgcgtgcgcagcagacgaccagaactgattcaaacctatgaggagtaccag tcttgtttccatatcatcaaagaatacctgacaatggataggagacacatggacatggatgaacaagtacgctacgaaaa tgttagacttagcacagacggcattttccacttggaggcccatgtataa |
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Protein
| Protein ID | pfu_aug2.0_1298.1_28188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28188.t1 MPVYLNTLNNAILRANLDPATKGNPAAYGITATNHPMKETNNQLNEDYILQGSDVLISIFIIVAMSFVPASFVVFLVYER SIKSKHLQFVSGIDPVMYWLANYVWDICNYIIPALCIIIILLIFQIPSYSSPQNMPAVVSLFLLYGWSITPVMYPASFWF KEPSAAYISLIVVNLFTGITCIVSSFLLEIFSYDHDLKKVNDIIKDVFLMFPNYCLGRGLMDIAYNEYRNEFYYKTGQYD KVHSPFTWDLTGKKLVAMTVMGLCFFLITLLCEFKFFLKRRLSHNPSLPVYDEDIDVAGERKRVLRGSGRNDLLRIQNLT KVYKTRKLGKHLAVDKLCLGVPTGECFGLLGVNGAGKTTTFKMLTGDILPSSGNAYLNRFSIVKDMLKVQQNIGYCPQFD ALYDELTAREHIQLYARLRGVPPREEKQVVEWALTKLGLTKYADKPSGTYSGGNKRKLSTAIALVGHPPLIFMMFDRGSK LGCPRMSPPPAWIHIPGASSGISYLISSKMAAPSFSLHIAENSNKDFELSMVHDLKDNVNLALNRSTDMSSISFHTFPHT SDRAVDGNNDTNILNGHCIHTREAQTTVWWRVRLTSQSTIQRIYIVYRNGFSDRLAGYSLFVTDEEIRSDQFFQGQNQPL FRDTGPNLPSTLQNLQLTPPVVGQVVTIYNNRSVLPFPAGYSSDALLELCEVEVFEYLCNGDTTSHGVADDFYITAWFAS IVLGNVDFTLKVEKLVFLEHLDQAADTFAIAELELVTDKQGSATHPDAELDGLVLTAHYVSSNILKSGQVSTGLWFFYPS LACTPGTYGPDCTETCGGCSGGAPCDSKNGTCYGACADGYFGDDCKLICRPGFYGFNCSMTCGNCYRNRPCHHGTGRCNA QSGPICQAGFRGGMCTTTLIEGQSSAVTAVLVVLSLLLVVGLVIVFIILWRRYTLSGMKDQATKVARQVYSSFKSVRDRR PTLNSIRSTKSTTAPAAQPHPDTDRGKEDVTININDRIPIVCEAGAEETEEPEEEVTQKIGDKATVYTNSVNYTNVVLGD IAVEELPRIILQKSENENEEFDEEYKGIPYGQHGQCVAAKKSENIKKNRFKAIYPYDNSRVILKGQSSDYINASFIDGNG KANAYIASQGPKPDTVDDFWTMIWQEDVATIVMLTNLRESGKEDEERQVVQYHYTSWPDHGVPEALGLQQFHQVVMKNTS KSQGPLLVHCSAGIGRTGTYIGLDVLLRQGQDTGFINVSNYVALMREQRMNMVQTLDQYIFLHTVLREGFRHVDESIPKS QFVTRYQTMTEAQQPTNMSTLRKQFQDQYIFLHTVLREGFRHVDESIPKSQFVTRYQTMTEAQQPTNMSTLRKQFQDLES CRPQYGEKDYKSAMLPTNKSKNRTSEALPVEQFRPQLTSKSEGHNDYINAVQISTYTEGEAMFVTRSPLPNTVVDCWRLI TDYEIDTVIIQGSTDNNDDFCTWIPPVDESKSCSSFDISKSNEEKQKDGLRTSILNILSEDTSLKVKLIEMVPWDPAFPV PPSPACVLRAVQLTRLWRHTNGTGPILFISPDGVKGCGIFSVIYNSVEQILEDDEVDIYNIVKRVRSRRPELIQTYEEYQ SCFHIIKEYLTMDRRHMDMDEQVRYENVRLSTDGIFHLEAHV |
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