Gene
| Gene Model ID | pfu_aug2.0_129.1_30258 |
|---|---|
| Locus | scaffold129.1 : 231171 ... 232952 : + |
| To GenomeBrowser | scaffold129.1:231171..232952 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_19060.1_54540 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30258.t1 | 1 | 1 | Hist_deacetyl | 1 | 77 | 2.8e-19 | 69.5 | 2.7e-23 | 4.0e-19 | 69.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30258.t1 | gi|557763136|ref|XP_005181281.1| | PREDICTED: histone deacetylase 4 isoform X1 [Musca domestica] | 0.0 |
| pfu_aug2.0_129.1_30258.t1 | gi|755868527|ref|XP_011291565.1| | PREDICTED: histone deacetylase 4 isoform X2 [Musca domestica] | 0.0 |
| pfu_aug2.0_129.1_30258.t1 | gi|755957573|ref|XP_011303797.1| | PREDICTED: histone deacetylase 4 isoform X5 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_129.1_30258.t1 | gi|755957587|ref|XP_011303801.1| | PREDICTED: histone deacetylase 4 isoform X6 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_129.1_30258.t1 | gi|755957570|ref|XP_011303796.1| | PREDICTED: histone deacetylase 4 isoform X4 [Fopius arisanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30258.t1 atgccaatagccaaggacttcaaaccggacattgtgctcgtgtcagcgggatttgacgcagcggtaggccatccggcacc cctcggtggttatctagtctccccagcatgctttggtcacatgacacgcgagttgatgtcgctagcggacggtaaagtgg tcctggctttagagggaggctatgatctgacagcaatctgtgattcctcagaaatgtgtattaaagctctacttggtgat gagcttcccccggtgaaagaagaagaattatgccgagtgccgtaccagcccgcactggagacgttagaacaaagtattaa catacagactaaacactggccaagtgtacagaggttcctaggaagcttacattactcattactcgaggcacaaaaacgtg agatggaggaagcagacactgtctcggccctagcgtctctatcaatggtgactggaaaacgaagtggttctatggagcaa gaaacagaacctgtagaagaggcaatggaggaggaacagtcatag |
|
Protein
| Protein ID | pfu_aug2.0_129.1_30258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30258.t1 MPIAKDFKPDIVLVSAGFDAAVGHPAPLGGYLVSPACFGHMTRELMSLADGKVVLALEGGYDLTAICDSSEMCIKALLGD ELPPVKEEELCRVPYQPALETLEQSINIQTKHWPSVQRFLGSLHYSLLEAQKREMEEADTVSALASLSMVTGKRSGSMEQ ETEPVEEAMEEEQS |
|