Gene
| Gene Model ID | pfu_aug2.0_129.1_30255 |
|---|---|
| Locus | scaffold129.1 : 138525 ... 150065 : - |
| To GenomeBrowser | scaffold129.1:138525..150065 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_5477.1_52553 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30255.t1 | 2 | 1 | RVP | 573 | 665 | 2.2e-08 | 33.8 | 6.3e-11 | 1.2e-07 | 31.5 |
| pfu_aug2.0_129.1_30255.t1 | 2 | 1 | Asp_protease_2 | 575 | 657 | 3.0e-09 | 37.2 | 3.3e-12 | 6.1e-09 | 36.2 |
| pfu_aug2.0_129.1_30255.t1 | 2 | 2 | Asp_protease_2 | 917 | 927 | 3.0e-09 | 37.2 | 8.0 | 15000.0 | -3.7 |
| pfu_aug2.0_129.1_30255.t1 | 2 | 2 | RVP | 918 | 930 | 2.2e-08 | 33.8 | 1.4 | 2700.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30255.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30255.t1 atggctagaacagatcctagaacagagggggtggacagggtgaaagggaggctggaggaaggagagaggggggagggaag agggagggaagggacaaaaagggagggagggggagaaagggggtgggaggagggagagaagggggtgggaggagggagga agggggcaggaggggagagggaagggaagggtgaaaaggaggggagtgaggaggaggtgggaggagggagttgtctgtgt ggacagttcattgtggacatttccttgggacaagacaggttgtctgtgtggacagttcattgtggacatttccttgggac aagacaggctacggctgctgacttgacggatgaaataacacgactggagagtgacatagcatcaatacagtaccaattgt cacgacagtcaacccctattgtcttaccaaatgtgacgagacgtagggacaggacgacctctcgtagagtgtcattttct gatctattaaatgacatagctcaaaatgtcaatacaagtacttatagcagtagtactagaccttcccatgtaagacaaag tagtaacgacggactagggaacgtaaatgtcgcgccagtcacaaatagtaatactgggcaagtaacgttgccaggcgcag gtgcaggtaatactaaggtcgctgatacgagatataagaaaaacatcgtcaaaccggcgacgtatgatggtaagtcatcg tggatagatttcaagtcacactttgacatttgcgcacaactcaatgagtggagtgaggacgaaaagggtctttatttagc ggtcgccttgcgagggggtgcccaggcagtactagggaatttaccgatagaatcgcgtaaaaattttaaagagttgtgta ctgcactcgaggataggtacagtccttctaatcaaatggacttatatagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntccttctaatcagatgga cttatatagggcacaattgaaagatagacgtcagaaggcgtcagaatctgttcctgaattaggacaggatataaataggt taacaaaccttgcctatgctaaggcaccgtcagatgtcagggagactcttgcaatggagaatttcattgaggctctacac aatgcagatatgagaataagaattaaacagtctaggcctaaaaccttgaacgaggcggtctgtttagcagtagagttaga tgctttcaatagcgccgagaaacgacgcgcagacactgtttctgtgcgagcagcagagagtcgggtatctaataaactct ccccagtattaaattttattgaagagacgaacaaagctctcactgatataagggctgacatacagtcgttaaagtcaaat aaaaccctaggtaatgtaaggaacggctcagacagcaagtctcaagggaaaacaaatttgagatgttactactgtaacaa agaggggcatatcaaaaagaagtgttatgcctttctcaatgcccaaaagaaaaggagaaccgggcagggaaatggtggac ctaaaggtcaagttaagcaacaagagtcagttcaagagaagaaagctggatcgagcaatgttatctcgaactctagttct atgggtagcactaatttgacaggtcagtctggtatgtttctgactgctaagattaatgacaaagaagtcaacttgctggt tgatactggagctacattatgtcttgttgctccgcacatacttggtgatctccctcttgacaaaatggagtcagacatac tgattgctgacggttcacagctctctatcaaaggggttacaacactatctattgacatagatggcaagacaacacaccaa aaggtagcagtagcagacattggtatagacggtattcttggtctagattttatgaaagggcatgggtgtgtgatagatac agtaaaaggttgcatgactattgacaagaaggacatccctttgaaaatagctggtaacactggatgttatagagtgtatc tggaggtggacctcattttacctagatactccgaggtaattactatgtgtcctgtacagacaacatctggaaaggtcatg acagacctaggacttggtatggtagaaccaattgacaaattcactaagtttgaccgtgcattgacagcacgcacattgac agataaggcagacaaagtccctgtaagacttatgaatctgcatgacaaggaccaaaaagtaaagaagggaactgtcatag cacagtatactcccatacacgaggtcttgcattcaccagtcggtgattcattcagtaatggtacggtacctgatcactta tctcgactgaacgagcagacttcacaaaggcttaacgaggagcaatcctctgttttcaagcagttcctactaaggtacca aggtttgtttgcaaaggatgactttgaccttggacgagcagagtctgtaaaacataacatcaacacaggtgatgcacatc cgataaagcaggctgctagaagctgctatcgcaggtttgttccaaactttgcatcactggctagccctcttcacaaatta acaaagatgggtactcggtttgattggactcaagcttgtcaggcagcgtttcttactttaaaggaagcgctcacttcagc ccctatattggcaaatccaaactttgcatatccatttattttagacactgatgcgagcgatcagtcgataggtgctgttc tgtctcagaatattgacggtactgaaagagtttgtgcgtttgccagtaggtcactgtcaaagtctgaacgcaggtattgc gtgactcgaaaagagttgttggcagtcgttcactttgtgaagcactttcgtcactacctgtatggtaggaaattccttat acggactgatcacagctccttacgctggctgatgcaattcaaaaatccagaaaatcagttagcaaggtggctagagatat tgtcggatttcgactttgaaatccagcacaggcctgggagacagcactgtaatgctgacgcattgagtagggtgccatgt cgccaatgcggatatataacagaatgggacaaagacgacgtagaacccttagcgaacaaggtctactgtgcttcctcgca cacgaccaattcacttagatacatgcaagcggaggacaaggacctaattaaagtcagaggttggctaaacagtaaggtcc gccctgattcgaaggtagtgcagagtgaaagctattacttgaagtctttatacagtcagttcgacagactatgtcaatta gatggcatactgtatcgtaaatgggaggactttgaagcaaacatgacaaaatactaa |
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Protein
| Protein ID | pfu_aug2.0_129.1_30255.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30255.t1 MARTDPRTEGVDRVKGRLEEGERGEGRGREGTKREGGGERGWEEGEKGVGGGRKGAGGEREGKGEKEGSEEEVGGGSCLC GQFIVDISLGQDRLSVWTVHCGHFLGTRQATAADLTDEITRLESDIASIQYQLSRQSTPIVLPNVTRRRDRTTSRRVSFS DLLNDIAQNVNTSTYSSSTRPSHVRQSSNDGLGNVNVAPVTNSNTGQVTLPGAGAGNTKVADTRYKKNIVKPATYDGKSS WIDFKSHFDICAQLNEWSEDEKGLYLAVALRGGAQAVLGNLPIESRKNFKELCTALEDRYSPSNQMDLYRXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXPSNQMDLYRAQLKDRRQKASESVPELGQDINRLTNLAYAKAPSDVRETLAMENFIEALH NADMRIRIKQSRPKTLNEAVCLAVELDAFNSAEKRRADTVSVRAAESRVSNKLSPVLNFIEETNKALTDIRADIQSLKSN KTLGNVRNGSDSKSQGKTNLRCYYCNKEGHIKKKCYAFLNAQKKRRTGQGNGGPKGQVKQQESVQEKKAGSSNVISNSSS MGSTNLTGQSGMFLTAKINDKEVNLLVDTGATLCLVAPHILGDLPLDKMESDILIADGSQLSIKGVTTLSIDIDGKTTHQ KVAVADIGIDGILGLDFMKGHGCVIDTVKGCMTIDKKDIPLKIAGNTGCYRVYLEVDLILPRYSEVITMCPVQTTSGKVM TDLGLGMVEPIDKFTKFDRALTARTLTDKADKVPVRLMNLHDKDQKVKKGTVIAQYTPIHEVLHSPVGDSFSNGTVPDHL SRLNEQTSQRLNEEQSSVFKQFLLRYQGLFAKDDFDLGRAESVKHNINTGDAHPIKQAARSCYRRFVPNFASLASPLHKL TKMGTRFDWTQACQAAFLTLKEALTSAPILANPNFAYPFILDTDASDQSIGAVLSQNIDGTERVCAFASRSLSKSERRYC VTRKELLAVVHFVKHFRHYLYGRKFLIRTDHSSLRWLMQFKNPENQLARWLEILSDFDFEIQHRPGRQHCNADALSRVPC RQCGYITEWDKDDVEPLANKVYCASSHTTNSLRYMQAEDKDLIKVRGWLNSKVRPDSKVVQSESYYLKSLYSQFDRLCQL DGILYRKWEDFEANMTKY |
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