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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1252.1_08285
Locus scaffold1252.1 : 145326 ... 173464 : +
To GenomeBrowser scaffold1252.1:145326..173464
Genes list of scaffold scaffold1252.1
Synonym pfu_aug1.0_177.1_50694

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1252.1_08285.t1 gi|676468138|ref|XP_009058112.1| hypothetical protein LOTGIDRAFT_105554 [Lottia gigantea] 7.0e-13
pfu_aug2.0_1252.1_08285.t1 gi|350407175|ref|XP_003488009.1| PREDICTED: plexin-A4 isoform X1 [Bombus impatiens] 5.0e-11
pfu_aug2.0_1252.1_08285.t1 gi|340709439|ref|XP_003393317.1| PREDICTED: plexin-A4 [Bombus terrestris] 5.0e-11
pfu_aug2.0_1252.1_08285.t1 gi|530608846|ref|XP_005296076.1| PREDICTED: plexin-B1 isoform X2 [Chrysemys picta bellii] 3.0e-09
pfu_aug2.0_1252.1_08285.t1 gi|620946158|ref|XP_007669763.1| PREDICTED: plexin-A4-like [Ornithorhynchus anatinus] 1.0e-06

Transcript
Transcript IDpfu_aug2.0_1252.1_08285.t1
Definition-
>pfu_aug2.0_1252.1_08285.t1
atgacgtttttgtttgtgatgctaaatatattggtactgtgtttattgactgcatgtgcccaaagtggtagcatcatcgg
aaaggggtatcatcaacggagtttctttaattttagtggaaaatttgacaatatccgaaatcttgcatttgacgagaatt
cgagcacactttatggtggtggcaggaacattttgctacttgtaaatgcagaagattttaacctaattggtaattcttcc
atcgaaactaattgtggtgaagtttcctgctctaatgaaagtcttgtcctagaagttatttcaagtaatgatggagcatt
cttactgtcctgtgccacaccgttgggtgattgtcagaaaagaaatttgagagacttgacagaattaaaccctaacctgg
tacaaagaagtccaatttctagttcgactataaacagtaacgttgcaagacttgttacaacttcaaataatggggagata
ttatactttgcgaggaattactcgactttcccagatcgaagtgtcacatattatccaattttagcagtaaatccagattc
gactgatcgattattttcctcgatcaccgctatgagtattcaaatgaaagatgagtataatatgaagtatccaatagatt
ttaaagcaatcgtagaaagtgacaattttgtttatttactgtctaaccagaactcatcgacaaaaatttcaaaaatatgc
aaacattctaagtcagaaaaattggcctacgaggatatgtttttgacttgttctcgggggcatactcagtttccttttgt
gaaagatacagtgatgtggaaagaggatggacagtttgttcttatcactctgttcacgttacatcaggaatcggataatc
caagagacgaaggtgcaatctgtgtgttttcagagaaagagattcttgaacattttcttcagtctcgccgtcaaagattt
aaatgtaatgaaaaccaaaaccttgacgagaaagatgtcatattcaacggggtacagagagagatattatatggatgtat
cgatgttacatacgcaccctttgctactgaagcggaaagagatggtacctaccatgtgaatgaagtaaatactttttaca
tcggtgttcgggaaaaagtcatggatatggaagtttcgaaagataacctctttgtagcaacacaacgaagaattgtaaaa
attagtggtgataactgcagtgagttcaaaacctgcaactcctgtatggcatctgggatttcaaaatgtggctggtgtgt
gatgaaaaatgaaaaatcagaaaccgaaggcatacaaaatcaggataaaacagaaaccaaagcaaacaaacaaaatcctc
caccaaataaaaagaagcggactcccgatatgagagtgagaccaggtgcccatgaagaggctacattatatgatatatcc
cctcctcctacaatattgaaagtcaaatcagcttag

Protein
Protein IDpfu_aug2.0_1252.1_08285.t1
Definition-
>pfu_aug2.0_1252.1_08285.t1
MTFLFVMLNILVLCLLTACAQSGSIIGKGYHQRSFFNFSGKFDNIRNLAFDENSSTLYGGGRNILLLVNAEDFNLIGNSS
IETNCGEVSCSNESLVLEVISSNDGAFLLSCATPLGDCQKRNLRDLTELNPNLVQRSPISSSTINSNVARLVTTSNNGEI
LYFARNYSTFPDRSVTYYPILAVNPDSTDRLFSSITAMSIQMKDEYNMKYPIDFKAIVESDNFVYLLSNQNSSTKISKIC
KHSKSEKLAYEDMFLTCSRGHTQFPFVKDTVMWKEDGQFVLITLFTLHQESDNPRDEGAICVFSEKEILEHFLQSRRQRF
KCNENQNLDEKDVIFNGVQREILYGCIDVTYAPFATEAERDGTYHVNEVNTFYIGVREKVMDMEVSKDNLFVATQRRIVK
ISGDNCSEFKTCNSCMASGISKCGWCVMKNEKSETEGIQNQDKTETKANKQNPPPNKKKRTPDMRVRPGAHEEATLYDIS
PPPTILKVKSA

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