Gene
| Gene Model ID | pfu_aug2.0_1252.1_08284 |
|---|---|
| Locus | scaffold1252.1 : 68526 ... 136124 : + |
| To GenomeBrowser | scaffold1252.1:68526..136124 |
| Genes list of scaffold | scaffold1252.1 |
| Synonym | pfu_aug1.0_177.1_50692 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| plexin-b2 isoform x1 | GO:0007399 GO:0016020 GO:0044464 GO:0048869 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1252.1_08284.t1 | 5 | 1 | TIG | 387 | 407 | 1.4e-17 | 63.4 | 1.9 | 4100.0 | -2.2 |
| pfu_aug2.0_1252.1_08284.t1 | 2 | 1 | PSI | 480 | 519 | 3.4e-07 | 30.3 | 2.9e-09 | 6.1e-06 | 26.3 |
| pfu_aug2.0_1252.1_08284.t1 | 2 | 2 | PSI | 841 | 873 | 3.4e-07 | 30.3 | 0.00092 | 2.0 | 8.6 |
| pfu_aug2.0_1252.1_08284.t1 | 5 | 2 | TIG | 880 | 955 | 1.4e-17 | 63.4 | 1.4e-15 | 2.9e-12 | 46.3 |
| pfu_aug2.0_1252.1_08284.t1 | 5 | 3 | TIG | 979 | 1050 | 1.4e-17 | 63.4 | 0.0023 | 4.8 | 7.2 |
| pfu_aug2.0_1252.1_08284.t1 | 5 | 4 | TIG | 1097 | 1127 | 1.4e-17 | 63.4 | 2.4 | 5000.0 | -2.5 |
| pfu_aug2.0_1252.1_08284.t1 | 5 | 5 | TIG | 1183 | 1228 | 1.4e-17 | 63.4 | 0.00017 | 0.35 | 10.8 |
| pfu_aug2.0_1252.1_08284.t1 | 1 | 1 | Plexin_cytopl | 1336 | 1856 | 0.0 | 336.0 | 0.0 | 0.0 | 328.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1252.1_08284.t1 | gi|642910643|ref|XP_008200041.1| | PREDICTED: LOW QUALITY PROTEIN: plexin-B [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1252.1_08284.t1 | gi|641727145|ref|XP_008153647.1| | PREDICTED: plexin-B2 [Eptesicus fuscus] | 0.0 |
| pfu_aug2.0_1252.1_08284.t1 | gi|478527759|ref|XP_004438061.1| | PREDICTED: plexin-B2 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_1252.1_08284.t1 | gi|674053253|ref|XP_008832966.1| | PREDICTED: plexin-B2 [Nannospalax galili] | 0.0 |
| pfu_aug2.0_1252.1_08284.t1 | gi|755751608|ref|XP_011282664.1| | PREDICTED: plexin-B2 [Felis catus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1252.1_08284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1252.1_08284.t1 atgacgctgttgttagtgatactacatatttttgtgatgtttcaagtgatggttttcgcccaaagtggtagcagcattgg aaacgggtattatcatcggagtttcttgaattttagtggaaaatttgacaacattcgaaatcttgcacttgacgagaatt cgaacacactttatgtcggtggcaggaacattttgttagccatagatacaattaattttaacttaattcgtaattcctcc attgattccaattgtagggaaagtaggtgttccaatgatagtcttgtgcttgaagttgttcagagcagtggcggagcatt tctattctcttgtgtattgccaacgggtttttgtgagaaaagaagcttgaaatacctccatctgacagggacaagcaaaa gtcctatcgcaagtacgcttcttataagtaacgttgcaagactggtcaataccaaaaataacggacagatattgtatttt gcgagaaacttttcgacctttcctttacaagtcgatgttgtctatccgtattatccaattttagcagtggatcccctgag cgatgatttttcgatgaaggatggcggattgagtatggaaatgaaccatcaggacttcgaaatggattacccaattgact ttaaggctatcgtggaaagtgacagttttgtatattttctttccaaccagaatgagtcgacaaagatttctaaaatatgc aaaagttctccacatagaaatcaggcgtacgaagatatatttctgacttgttctcgaggggatactcaatatccctttgt caaagatgcagtcatgcttaaagagaatggtcagtctatcttggttacccttttcacattacaagaagaatctgatgacc cagaggctcatggtgttatatgcgtgttttccgagaaccaacttctggaaaattttctcaagtctcgaaaggaaagatat gaatgtcctgctcggcatttaccgcaaaatgatttcatatttaaggatgcctttgcaaaactgccgcctcctaatcaatg cattaatggtagcagttcggatacgccattggactacaacagaacaatacacgaatcgaactactgtgcaaatagctcca taggtggtacccctcggattattatcggatttcatacactccacggagaagcaaacgtgacaattgacggatcacctacg aacatcacggcgcggcagattggcaacacaggcgcattctatgttggcgactctattgggactattcgggagttttctat tgaaatggaaaacgataatacaggtatctacattgttcaagaagtgaattcctttaggcttggtgtcccagaaaaggtca tggatttggtgacctcgaaggattctctttttgtagcaacaagagaacgagttgtgaaaataaaagtccaaggagaatgt ggtcaatttgacagctgcagttcgtgtatggcatcacgagtgtcaaaatgcggatggtgtgtgatggaaaataagtgtac agagagtggtacagagaactgcagattttatgaacaacagattcattggcttcctgtcatcaagaataaatgcctgaaaa tcaactttaaagaaggagctcgacaaccattgtcggatgctaagaacgtttttaagccatcactacagttaactccgatg atatcgagaaccaacttttcattttggtgccgcttagaggatcgaacagaatcgcccttgaattttactggtccttttgg aacgtgtgctatagatggtcagaaggggcgaaatcattctgaagtaactgcaggaaggaaaacgttcactatccttgcaa aggcaaaacatcccgaaaacaataccttcgtgactatcgcaacctcagactttgagatttacgactgttcttcatatacc acgagaagtatcagagaggtccagtctgttaataacgtatatacatgttatgatgactctgatgttggcgtaaaatatga attgttggttgtgttagcggctaccttgtacactgtatccaaactttctagccgggggcacctgcgatttgcgacttgtt tgtgtagttatctcacagtgaggaaatgcaattgtgcgttcctcgggacctctgggaaaccggaaaagtgggaggataaa atggagtgtccttatgtcataggaaaccagaaattgaaaattgctaacaataagcttacacaacttgtgattcacgctag gaatttagttaaaatgggagacttttaccatggatgcaagattggagttgagacatttagggcagcttacaatataacac acgatttaattatatgccagaatgtaacaataaacgcagcttctggtgctataacgaaccttcttgttacagttatatct cgtcgcgagaacggcgaagaagtcgtaacatatacgttgttaaacttcaagaaaagtcaaacttacgtagaagcatactc gtgtgcgccattgcttcaaagatttgcgtctaggcgcacggatgattgcagttcttgtaaatacctctcaagacagggat atgaatgtgactggtgtacatcatcatcgtcatgtaccagtggcgaatgttcaaacagaactgtaccttgtggaccaccc gagttaattaatataacaccagacaaaggtcctatcgagggtggcacccgtgtcacgatacagggagttaatctaggaat gaacagctcagatttaaacattaccattggcggacagcagtgttctgacgtcatttttgacaattctcgcagggttgttt gtacgaccgggaaaataagccaatccgaagatacgggttctcaagttgttgttgaacggaaaacggatagtggtgtgata caaggaaatctccaacgtcgattttattatcagacactgggcagtatcgaacttttggaaccaagaatcggaataaagtc tggaaatgccatagtaagttttaaaagccagttcatcgatcaacgagctaaaatcaaattcattggagaaaagtcagttt acgactgtgctcagctaataagctctgcaggaaaagtaaagtgccttagtcctaaagttgaagatgacgaaacggggatg tataacatcactgtgatgtatgatggagtcaacgttacgctggaagatacgtatgaaataatatcggatcctgaaataat accaccctcagagctcaagaccataagatcaggcggtttagaactgaaaatatcagcaagaggtccttttgattttggaa ttgtgtccgaaaaacatttgagagtggggaatgctagcaaaccatgcatcgttaaaggaaatgcaaagaatgccgttttt tgtacctatccaccttttacaccaagtagaagaaatagaagaagaagaaagcgagatgttggggctgagcaagcccgttt agaacttgacggtttgagtacgttcctaggatttgttagatatgtggaggatcctaaattcaagaacttgactgcagtat tcgagtacgacccgacaatagataaaatgctggaactttacggcgaaagtctgacaactgtaacatcaaaccctgaacat tataatgtatacattggatctggattatgccatagtgagaaccttacgtcatctttattgacttgcaaacctccagagaa agaaccaagtccatggagaggggacaagaaactaattataagagtggaaattggtttcaaagaggtggttgttggagaag caaagtacatcacagagtttcagtggctgatagccgttattgctgccttgtgtgctgttgtcctggtgacgatcatagta atggcagtcattgtctatagagtaagaagaagaagcaagaagagagagcacgaaatattgatggaaatgcagagaatgga ggacgaccttcgagaggaaggaagggatgaatttgccacgatgcagcttacaatcaccaatatcaagaccgaccttgttt ctacggggattccgttcaatgcttatgacatatatgtcatgaaaatactgttcccgaattctgagcatgaaaccatcaac aaaactcttctacataaagatttggttccatcgaagggtatgagaacagccatggatcagtttgaaggtttgttacggaa taggttctttgtcagatgtctgatcggatctttggagcgtcagaagaagataacaatgcaagacaagattgtgaaatgct tgctcgagaatcttgtagattctacacccaagaaacaacatcgagtgatattcaacagaatcgaaaacattacccttaga cttcttatcaactggttatacattgccttgtttccgcactttaaggacggcggtggtaccagtttgtttatgttatacaa ggcaattctgaccgtggtagaaaaaagacccgtggattgtgtcaccggagatgccaaaaataccttgtcacaacaccgat tcttgagatgtaaagtggatttcaatattatgacacttacaattgacttgaacggagatggccatgagttttcgtgtgag gtgctggactgtgacaccatatcacaagtcaaacagaaatgcttacgtcagatttacaaaaacagaccggcgtcacagat gccatcaactgatgaactcatactggaatggaaaatgggtcacggtaaactggctttgaacgactttgaccatacgagtg ttcgggaaggaaacaaaatccagatgaatactctgaaacattacaacgtcaaagacaaaagtaacatggagctacattat aagttctctccacctaacccagacggaaacgaaccggaagaaacatatgagaattatgtcaaacagccatcgtcgcctaa cgctatcatgttacagatgccaacattagtgacagaggaaagtttggagaaaatggaaaggtggcatttagatgaagtag tggaggaatctacacctgatgacacgaacatcacagcgcgccatcttaaagaggagaaaggcatgcatatcacaagtctt atgcacaccaagctaattctacaagagtacatacggacattactggatcagattctagacgaaaacatacagtctatagt gcattatgtctttggtacactgaacacaatagctgaaagtaaaggtgtggacccagacgtactacagtgctggaaatcag agagttacgccatacgtatctgggcttccttagtggctacccctgatgtcttgtttgacgtggaccgtcctaaacacata gaaccttcattggacagcattaggcaactcatcatcgactgcttccacaatacaaaaatcaccaaggactcctcgcttca aaagttattattcgcaacggaagttccagaataccagaagaagatagacatcttttacaagaggctgtcacagttagagt gtataggagagggacaatttgccaacgaaatgaccaaactctcaaacatgcagcagtccagtttcgactttaagaaactg cccgtcctattgaaaatatacaagtttatacaatcatacattgaagatgttctggaagatttggacgacgacgaggacgc caagagtctggatttacgtgctaaactagaaaccgtcattgaacaaatggaccaagacgagccggaccattctgacggtt ag |
|
Protein
| Protein ID | pfu_aug2.0_1252.1_08284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1252.1_08284.t1 MTLLLVILHIFVMFQVMVFAQSGSSIGNGYYHRSFLNFSGKFDNIRNLALDENSNTLYVGGRNILLAIDTINFNLIRNSS IDSNCRESRCSNDSLVLEVVQSSGGAFLFSCVLPTGFCEKRSLKYLHLTGTSKSPIASTLLISNVARLVNTKNNGQILYF ARNFSTFPLQVDVVYPYYPILAVDPLSDDFSMKDGGLSMEMNHQDFEMDYPIDFKAIVESDSFVYFLSNQNESTKISKIC KSSPHRNQAYEDIFLTCSRGDTQYPFVKDAVMLKENGQSILVTLFTLQEESDDPEAHGVICVFSENQLLENFLKSRKERY ECPARHLPQNDFIFKDAFAKLPPPNQCINGSSSDTPLDYNRTIHESNYCANSSIGGTPRIIIGFHTLHGEANVTIDGSPT NITARQIGNTGAFYVGDSIGTIREFSIEMENDNTGIYIVQEVNSFRLGVPEKVMDLVTSKDSLFVATRERVVKIKVQGEC GQFDSCSSCMASRVSKCGWCVMENKCTESGTENCRFYEQQIHWLPVIKNKCLKINFKEGARQPLSDAKNVFKPSLQLTPM ISRTNFSFWCRLEDRTESPLNFTGPFGTCAIDGQKGRNHSEVTAGRKTFTILAKAKHPENNTFVTIATSDFEIYDCSSYT TRSIREVQSVNNVYTCYDDSDVGVKYELLVVLAATLYTVSKLSSRGHLRFATCLCSYLTVRKCNCAFLGTSGKPEKWEDK MECPYVIGNQKLKIANNKLTQLVIHARNLVKMGDFYHGCKIGVETFRAAYNITHDLIICQNVTINAASGAITNLLVTVIS RRENGEEVVTYTLLNFKKSQTYVEAYSCAPLLQRFASRRTDDCSSCKYLSRQGYECDWCTSSSSCTSGECSNRTVPCGPP ELINITPDKGPIEGGTRVTIQGVNLGMNSSDLNITIGGQQCSDVIFDNSRRVVCTTGKISQSEDTGSQVVVERKTDSGVI QGNLQRRFYYQTLGSIELLEPRIGIKSGNAIVSFKSQFIDQRAKIKFIGEKSVYDCAQLISSAGKVKCLSPKVEDDETGM YNITVMYDGVNVTLEDTYEIISDPEIIPPSELKTIRSGGLELKISARGPFDFGIVSEKHLRVGNASKPCIVKGNAKNAVF CTYPPFTPSRRNRRRRKRDVGAEQARLELDGLSTFLGFVRYVEDPKFKNLTAVFEYDPTIDKMLELYGESLTTVTSNPEH YNVYIGSGLCHSENLTSSLLTCKPPEKEPSPWRGDKKLIIRVEIGFKEVVVGEAKYITEFQWLIAVIAALCAVVLVTIIV MAVIVYRVRRRSKKREHEILMEMQRMEDDLREEGRDEFATMQLTITNIKTDLVSTGIPFNAYDIYVMKILFPNSEHETIN KTLLHKDLVPSKGMRTAMDQFEGLLRNRFFVRCLIGSLERQKKITMQDKIVKCLLENLVDSTPKKQHRVIFNRIENITLR LLINWLYIALFPHFKDGGGTSLFMLYKAILTVVEKRPVDCVTGDAKNTLSQHRFLRCKVDFNIMTLTIDLNGDGHEFSCE VLDCDTISQVKQKCLRQIYKNRPASQMPSTDELILEWKMGHGKLALNDFDHTSVREGNKIQMNTLKHYNVKDKSNMELHY KFSPPNPDGNEPEETYENYVKQPSSPNAIMLQMPTLVTEESLEKMERWHLDEVVEESTPDDTNITARHLKEEKGMHITSL MHTKLILQEYIRTLLDQILDENIQSIVHYVFGTLNTIAESKGVDPDVLQCWKSESYAIRIWASLVATPDVLFDVDRPKHI EPSLDSIRQLIIDCFHNTKITKDSSLQKLLFATEVPEYQKKIDIFYKRLSQLECIGEGQFANEMTKLSNMQQSSFDFKKL PVLLKIYKFIQSYIEDVLEDLDDDEDAKSLDLRAKLETVIEQMDQDEPDHSDG |
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