Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1216.1_21474
Locus scaffold1216.1 : 148891 ... 168225 : -
To GenomeBrowser scaffold1216.1:148891..168225
Genes list of scaffold scaffold1216.1
Synonym pfu_aug1.0_8493.1_02605

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1216.1_21474.t1 gi|676437851|ref|XP_009048338.1| hypothetical protein LOTGIDRAFT_172905 [Lottia gigantea] 8.0e-34
pfu_aug2.0_1216.1_21474.t1 gi|524916690|ref|XP_005113117.1| PREDICTED: DNA ligase 1-like, partial [Aplysia californica] 2.0e-15
pfu_aug2.0_1216.1_21474.t1 gi|585646812|ref|XP_006811803.1| PREDICTED: janus kinase and microtubule-interacting protein 1-like [Saccoglossus kowalevskii] 3.0e-13

Transcript
Transcript IDpfu_aug2.0_1216.1_21474.t1
Definition-
>pfu_aug2.0_1216.1_21474.t1
atgaacatggaaacacagagacgatatcacagtgcatttcagcgcttaaatctcaaagatgactttgaatttgatatcaa
tgatatcagcagagcttcaacaccaacgagtaccatgagctcgaagtctgaaggtcaccgacgccgcagtgaaaggtcac
atcatcatagaagtcattcaatcgaggattacaaacggaaaatagcgagactaaaaagtgaactggagtcagagaaggct
cgcacaaagcaaatgcatagagagaaatcgtcagaaataaaaatgctcagggaagcatatgaaaaagacaaaaagaagga
gatagaaagtatcgaggtgaaactaaccgaggccaagaagagggagatagagcttctacaagagacaataatgaagaata
aagataaagagctgcagcaggtcctcaggtacaaggaaggcgaagtactcagactacgggaaaaattcgaacaagaaaag
gaaaaaattaaagaagccgtgttagagtcagagaaaagacagtttgaggagaatgcacgaaagatggaggaacaaatgca
cagattgaaagaagagaaggacaaatatgagcaggattataaacgtaagtgtgaagaagagaaaaagaaagaagcagaat
tttcgcagattaaagaaggatacgatgtggaactgagaaagatattaggcgagcaccgcaagctagctatggggaattta
gaaaagttaaaactggctgaaaaacagctgaatgagggtgtgatatcagaggatgaagctatgtctatcacggaatcttt
acggattacacctttttcggagatttctagtcgggcaccaagtcgcccgcttataacgcggatggatgaattcaaactag
aagaactagagatagaaaagtacctagcctcggccacaccctcccccaaccccgcggcaatgttaggcaggaccttcacg
atagatgggaaatcgcccttaagtgtaatacaagccccagatagcgtctgtaacacgcccagtatagctggcagcgaacc
cagcaccacgaccaaagaggtatatcatcagactttatctgtgccaaataaagacaaagtaatcatcaccgtaagtaatg
gaatggatgtaaaactcactataattacagtcaaactcactataattacagtcaaactcactataactacagtcaaactc
actataattgcagtaaaactcactataattacagtcaaactcactataattacagtcaaactcactataattacagtcaa
actcactattacagtcaaactcactattaccaggcaaactcactttacaatcaaactcactattacaatcaaactcacta
ttacagtcaaactcactattaccaggcaaactcactttacaatcaaactcactattaccaggcaaactcactattacagt
caaactcactatggcagtcaaactcactatgacagtcaactcactattacagtcaaactaactttacagtcaaactcact
ttacagtcaaactcactttgcaatcaaactcgctattacagtcaaactcaattttatagtcaaactcacctctaaagtca
aactcactattacagttgaactaattattactcaatattacggtgtcagtcaaactcactatcacattatcacagtaaaa
cttgccatacagtaa

Protein
Protein IDpfu_aug2.0_1216.1_21474.t1
Definition-
>pfu_aug2.0_1216.1_21474.t1
MNMETQRRYHSAFQRLNLKDDFEFDINDISRASTPTSTMSSKSEGHRRRSERSHHHRSHSIEDYKRKIARLKSELESEKA
RTKQMHREKSSEIKMLREAYEKDKKKEIESIEVKLTEAKKREIELLQETIMKNKDKELQQVLRYKEGEVLRLREKFEQEK
EKIKEAVLESEKRQFEENARKMEEQMHRLKEEKDKYEQDYKRKCEEEKKKEAEFSQIKEGYDVELRKILGEHRKLAMGNL
EKLKLAEKQLNEGVISEDEAMSITESLRITPFSEISSRAPSRPLITRMDEFKLEELEIEKYLASATPSPNPAAMLGRTFT
IDGKSPLSVIQAPDSVCNTPSIAGSEPSTTTKEVYHQTLSVPNKDKVIITVSNGMDVKLTIITVKLTIITVKLTITTVKL
TIIAVKLTIITVKLTIITVKLTIITVKLTITVKLTITRQTHFTIKLTITIKLTITVKLTITRQTHFTIKLTITRQTHYYS
QTHYGSQTHYDSQLTITVKLTLQSNSLYSQTHFAIKLAITVKLNFIVKLTSKVKLTITVELIITQYYGVSQTHYHIITVK
LAIQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495