Gene
| Gene Model ID | pfu_aug2.0_12035.1_19766 |
|---|---|
| Locus | scaffold12035.1 : 1 ... 4158 : - |
| To GenomeBrowser | scaffold12035.1:1..4158 |
| Genes list of scaffold | scaffold12035.1 |
| Synonym | pfu_aug1.0_3381.1_01443 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12035.1_19766.t1 | 2 | 1 | Acatn | 4 | 66 | 8.0e-15 | 54.3 | 8.2e-11 | 2.4e-07 | 29.6 |
| pfu_aug2.0_12035.1_19766.t1 | 1 | 1 | MFS_1 | 10 | 288 | 2.9e-23 | 82.1 | 1.2e-26 | 3.6e-23 | 81.8 |
| pfu_aug2.0_12035.1_19766.t1 | 2 | 2 | Acatn | 98 | 142 | 8.0e-15 | 54.3 | 2.3e-10 | 6.8e-07 | 28.1 |
| pfu_aug2.0_12035.1_19766.t1 | 1 | 1 | OATP | 160 | 292 | 3.0e-06 | 25.6 | 1.5e-09 | 4.3e-06 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12035.1_19766.t1 | gi|676422875|ref|XP_009044023.1| | hypothetical protein LOTGIDRAFT_102306 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_12035.1_19766.t1 | gi|524874815|ref|XP_005094141.1| | PREDICTED: major facilitator superfamily domain-containing protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_12035.1_19766.t1 | gi|573877601|ref|XP_006627045.1| | PREDICTED: major facilitator superfamily domain-containing protein 3-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_12035.1_19766.t1 | gi|327287428|ref|XP_003228431.1| | PREDICTED: LOW QUALITY PROTEIN: major facilitator superfamily domain-containing protein 3 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_12035.1_19766.t1 | gi|530595217|ref|XP_005291175.1| | PREDICTED: major facilitator superfamily domain-containing protein 3 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12035.1_19766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12035.1_19766.t1 atgaggaatgtcatctttttagcttacctgtattttattcaaggcttgccatatggactacagtcaagattcctgcctat ctacttcagatctcatggaatgtcattatctgatataagtcttttcaaactgctactcacaccatggatgtgcaaggcat tgtgggcaccattagtggacaaatatggaacaaaaagaaagtggctgtcatggagcatgctgggattgataatcacttgc attatgggatcagtatccccaccagatcttctagcccagcttgcagtagtgctttttctgttcaatcttctgacttccac tcaagatattgcagtggatggtatagcaatacaaattttatcgcattcagaattggcatatgggaacatagcccaggttg tagggtataaaatgggagcaatatttggagggggtgttttaacttggctcagtgactatttaagatggtcctatcttttc ttgtggataggtgtggtttatgggatatctcttgtagtgacaaacatgtttgtacctgctcaatacagaaaagaatcaaa caaatctgaagaaaaacaagaagacattggtgataaagaaacccatgaagagctgggtgagagaggtggaaagctgccat ggtttatacaacactttattagaatatttcagacacctgggacaaagtggatggcagtgtatgtgctactatataagcta ggtgagcaaggagccctgagtatggtgcccatgtttttgattgataaaggcatagctgcttcccaagtaggattttggac aggaatggttggtcaagcagtgtccattgttggttcttttatgggtggaaccatcatctcacacttgagttttatctatt atgagtatgtgtgccatgttacttgtaagtggaactgttactacggcaacatttacaatgatgatgcagtgttcccagat ggcgccacaaa |
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Protein
| Protein ID | pfu_aug2.0_12035.1_19766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12035.1_19766.t1 MRNVIFLAYLYFIQGLPYGLQSRFLPIYFRSHGMSLSDISLFKLLLTPWMCKALWAPLVDKYGTKRKWLSWSMLGLIITC IMGSVSPPDLLAQLAVVLFLFNLLTSTQDIAVDGIAIQILSHSELAYGNIAQVVGYKMGAIFGGGVLTWLSDYLRWSYLF LWIGVVYGISLVVTNMFVPAQYRKESNKSEEKQEDIGDKETHEELGERGGKLPWFIQHFIRIFQTPGTKWMAVYVLLYKL GEQGALSMVPMFLIDKGIAASQVGFWTGMVGQAVSIVGSFMGGTIISHLSFIYYEYVCHVTCKWNCYYGNIYNDDAVFPD GAT |
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