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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_11907.1_26422
Locus scaffold11907.1 : 493 ... 2765 : -
To GenomeBrowser scaffold11907.1:493..2765
Genes list of scaffold scaffold11907.1
Synonym pfu_aug1.0_7648.1_53005

Manual annotation
Annotation by Blast2GO
Annotation GO
protein GO:0006810

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_11907.1_26422.t1 1 1 ASC 83 176 4.2e-20 71.8 3.9e-24 5.8e-20 71.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_11907.1_26422.t1 gi|260801241|ref|XP_002595504.1| hypothetical protein BRAFLDRAFT_69095 [Branchiostoma floridae] 3.0e-12
pfu_aug2.0_11907.1_26422.t1 gi|156356165|ref|XP_001623800.1| predicted protein [Nematostella vectensis] 8.0e-12
pfu_aug2.0_11907.1_26422.t1 gi|156369987|ref|XP_001628254.1| predicted protein [Nematostella vectensis] 1.0e-11

Transcript
Transcript IDpfu_aug2.0_11907.1_26422.t1
Definition-
>pfu_aug2.0_11907.1_26422.t1
atgctgtgccggctgatgttactacccgaggagtttgaccgacattcagagaggtcaggtggtcagggccatgtctcctc
taatgaggtttggacggggcttgttatggagtccagtcgtcacagtgataatttcatcatcatgcgtaatttaggctggg
caaacaagaaaaatgacgactcatctttgtcggaggttgaaactgatgaagaggacacagtaaaatctatactgaaggag
tgtgctcagcagactagcctccatggtatcgctcagataacgtccgccaggcggcctcatgaaaggatactatggctgat
tgtcgttctagccctgacaggatacctgggattccagatggtcaatctgacaaaggagtacatgcgtcatcccttaaaga
ccactgtcacgctagagttcagtcccctaactttcccggcggtgtcgttctgtaacatgaaccaagtcagagattcaaaa
attcaanaagaaaacaaaatgggcgggcttcattgtacagagagtttgttgaagattttacaccaggcgagttctatagt
aaatatagggacagaatctcaataa

Protein
Protein IDpfu_aug2.0_11907.1_26422.t1
Definition-
>pfu_aug2.0_11907.1_26422.t1
MLCRLMLLPEEFDRHSERSGGQGHVSSNEVWTGLVMESSRHSDNFIIMRNLGWANKKNDDSSLSEVETDEEDTVKSILKE
CAQQTSLHGIAQITSARRPHERILWLIVVLALTGYLGFQMVNLTKEYMRHPLKTTVTLEFSPLTFPAVSFCNMNQVRDSK
IQXENKMGGLHCTESLLKILHQASSIVNIGTESQ

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