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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_11687.1_26412
Locus scaffold11687.1 : 1 ... 4582 : -
To GenomeBrowser scaffold11687.1:1..4582
Genes list of scaffold scaffold11687.1
Synonym pfu_aug1.0_9189.1_02720

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_11687.1_26412.t1 gi|676470034|ref|XP_009058724.1| hypothetical protein LOTGIDRAFT_175815 [Lottia gigantea] 3.0e-24
pfu_aug2.0_11687.1_26412.t1 gi|391339371|ref|XP_003744025.1| PREDICTED: transient receptor potential cation channel subfamily M member 1-like [Metaseiulus occidentalis] 3.0e-20
pfu_aug2.0_11687.1_26412.t1 gi|532029832|ref|XP_005357865.1| PREDICTED: transient receptor potential cation channel subfamily M member 1 isoform X1 [Microtus ochrogaster] 2.0e-13
pfu_aug2.0_11687.1_26412.t1 gi|676421328|ref|XP_009043815.1| hypothetical protein LOTGIDRAFT_102258, partial [Lottia gigantea] 4.0e-13
pfu_aug2.0_11687.1_26412.t1 gi|751776821|ref|XP_011197389.1| PREDICTED: transient receptor potential cation channel trpm [Bactrocera dorsalis] 1.0e-12

Transcript
Transcript IDpfu_aug2.0_11687.1_26412.t1
Definition-
>pfu_aug2.0_11687.1_26412.t1
gatttgattgcactagtcattatgtgaatgtgacaccaagtttttgtgccagtgagccacttatagagcccatacagaag
tgtccctattccagtttctttggctatgttgtcaccattcagtatctcctcatatgtaaactggtgttggtcacattact
gtttgcaatgtttgcgttaacaattgccaaagtggacaacatagccagtgatatttggaagtttcaacgttatgccctgg
tggtggagtttgagcaacatttgattttcccgccgcctttcacgatactgtactatttttatatcctcatcatgtcgttt
gttaataaaatcagaggttgtcggagagcctgtttaggacgctgccgtcataaagattcaaagcaagatccggagatgag
tcatggtgtgaccaagcagaaacgttcccagaattataactactggaagcagatcaacaacatacaggatgacatgagat
ttcagaagaaaaatatcaaaaggcttaatgagaggatattagagttagagagaaccatttcgaccagtagaatgtaccta
gaaagtatcttccacaagctggacaaaacaggtgaaattttcatggtagaatga

Protein
Protein IDpfu_aug2.0_11687.1_26412.t1
Definition-
>pfu_aug2.0_11687.1_26412.t1
FDCTSHYVNVTPSFCASEPLIEPIQKCPYSSFFGYVVTIQYLLICKLVLVTLLFAMFALTIAKVDNIASDIWKFQRYALV
VEFEQHLIFPPPFTILYYFYILIMSFVNKIRGCRRACLGRCRHKDSKQDPEMSHGVTKQKRSQNYNYWKQINNIQDDMRF
QKKNIKRLNERILELERTISTSRMYLESIFHKLDKTGEIFMVE

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