Gene
| Gene Model ID | pfu_aug2.0_1167.1_24742 |
|---|---|
| Locus | scaffold1167.1 : 136697 ... 158355 : - |
| To GenomeBrowser | scaffold1167.1:136697..158355 |
| Genes list of scaffold | scaffold1167.1 |
| Synonym | pfu_aug1.0_3076.1_08522 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| skeletal receptor tyrosine-protein kinase | GO:0016301 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1167.1_24742.t1 | 2 | 1 | I-set | 13 | 106 | 4.2e-17 | 61.7 | 4.1e-12 | 4.3e-09 | 36.0 |
| pfu_aug2.0_1167.1_24742.t1 | 4 | 1 | Ig_2 | 21 | 107 | 2.3e-13 | 50.0 | 9.6e-09 | 1.0e-05 | 25.5 |
| pfu_aug2.0_1167.1_24742.t1 | 2 | 1 | Ig_3 | 30 | 91 | 3.1e-08 | 34.0 | 0.0007 | 0.74 | 10.3 |
| pfu_aug2.0_1167.1_24742.t1 | 2 | 1 | ig | 31 | 91 | 1.4e-06 | 28.3 | 4.3e-06 | 0.0045 | 17.0 |
| pfu_aug2.0_1167.1_24742.t1 | 2 | 2 | I-set | 117 | 199 | 4.2e-17 | 61.7 | 6.0e-08 | 6.4e-05 | 22.7 |
| pfu_aug2.0_1167.1_24742.t1 | 4 | 2 | Ig_2 | 121 | 199 | 2.3e-13 | 50.0 | 1.2e-07 | 0.00013 | 22.0 |
| pfu_aug2.0_1167.1_24742.t1 | 2 | 2 | Ig_3 | 122 | 193 | 3.1e-08 | 34.0 | 5.1e-07 | 0.00054 | 20.4 |
| pfu_aug2.0_1167.1_24742.t1 | 2 | 2 | ig | 126 | 190 | 1.4e-06 | 28.3 | 0.0015 | 1.6 | 8.9 |
| pfu_aug2.0_1167.1_24742.t1 | 1 | 1 | Fz | 229 | 364 | 3.0e-11 | 43.7 | 8.6e-14 | 9.1e-11 | 42.1 |
| pfu_aug2.0_1167.1_24742.t1 | 4 | 3 | Ig_2 | 350 | 390 | 2.3e-13 | 50.0 | 3.8 | 4000.0 | -2.0 |
| pfu_aug2.0_1167.1_24742.t1 | 1 | 1 | Kringle | 380 | 458 | 4.7e-23 | 81.0 | 1.3e-25 | 1.3e-22 | 79.6 |
| pfu_aug2.0_1167.1_24742.t1 | 4 | 4 | Ig_2 | 399 | 410 | 2.3e-13 | 50.0 | 2.1 | 2200.0 | -1.2 |
| pfu_aug2.0_1167.1_24742.t1 | 1 | 1 | Pkinase_Tyr | 558 | 832 | 0.0 | 308.0 | 0.0 | 0.0 | 307.5 |
| pfu_aug2.0_1167.1_24742.t1 | 1 | 1 | Pkinase | 559 | 829 | 9.3887e-44 | 149.5 | 0.0 | 1.59748e-43 | 148.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1167.1_24742.t1 | gi|676476937|ref|XP_009060958.1| | hypothetical protein LOTGIDRAFT_219301 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1167.1_24742.t1 | gi|704553271|ref|XP_010180388.1| | PREDICTED: muscle, skeletal receptor tyrosine-protein kinase, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_1167.1_24742.t1 | gi|746862747|ref|XP_011062302.1| | PREDICTED: tyrosine-protein kinase transmembrane receptor Ror2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_1167.1_24742.t1 | gi|556979118|ref|XP_005996503.1| | PREDICTED: muscle, skeletal receptor tyrosine protein kinase-like isoform X5 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1167.1_24742.t1 | gi|719741607|ref|XP_010209804.1| | PREDICTED: muscle, skeletal receptor tyrosine-protein kinase [Tinamus guttatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1167.1_24742.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1167.1_24742.t1 atgatcattttgaaaggatttcttgacttggaattccacttcacacgacaaccaaagaacgccacagtgctggaggattc ccgctatgctttgcactgtatggccagaggggagggggcgtgtcggcgaaaagtcaatgtcaaagtcaaatggttcaagg acggtgtcagaattccaaagaaaggaccgaattaccgcacgatcagaacatccgggactttacgtttcaacaacataaag attacggacaggggagagtactattgtaaagcagtatgtaagagacatcgactcacatccaatgaggcgaccatccaagt tgaagcgaaggcgaagttcacagagatgcacccccacgaccggaacatcgtgaccggatccccgattcagcttaaatgca tagtagctggaatcccgaccccacagatagaatggcaccaggaaaacttcacgttgagtgagggtgaggtaccgggtgtt aagatacagaccaataacgacagctcccacatcgtccgctctatcctctacataccccgtgtggaccataacgtcacctt cacctgcctcgcttttaatacaccactaggaaaaaaggaggtcatagaacgcagagcaaaagttgtcgttcttcctaaac cggagtccagcaattctagtacaccgaaaggaccttttggaatatgcgccccctacaacggaagtatatgtagtaaaatc ctgggccagcgtgtggtgtactacaacacatcgtacagcaatcccgcacaggaacaggaaatcatggtcagacatctctt agaccgaattaactcagccaccatcatggagagccactgcggtgtaccagcgctcaaaattttctgtcaccaagcatatc caggctgcgaagaggtcaaagggcaaaacgactacaatgtcaagatcaaaccgttgtgcagggagagttgtttggcagtg aaggatctgttatgttttaaccagtggatcgaggtagctaacaggatcaacctgcgtaaccccgcccatcactatcattt gccggactgtgccgccctgcccagtaagacggacaatgacacacagtgtacggacgccaatctcttctacagggacgcat cactagtcagcaatgactgctacaagggtacaggtcagtggtacaatgggatggtcaatgtaacaaggagtggtctgacc tgtcaggcctgggcatcacagaccccccatgtacataacaggcccccaggtgtgttccccagcctggagggggcggagaa ctactgccgtaacccgggttcagaggaggaccgaccctggtgctacactactcatagtctgactagatgggacttctgtg aaatcaaaccctgtgccacggccgtaaaccctgtaatgcaggagcctgtagagaagtcggtgggtgtgattgccaaggtc atcattgccgttgtcagtatcgtgggtgtttttgtggtggccctcatcgcctgcctgtgttaccagatcatcaagcagcg ccgcaatgttcgctataacaccacgccacaagatgatattgacattgatattgacaagcttcctacaaatatctcctacc atcgggtcactgatagcaccaaaatgaaccccaaactggaatgtctggaatatccgcggaatgacattgtctacataagg gacattggacagggagcttttgggcgtgtgtttaaggcaaaggcgccaaatttgaaaaataaaggagaggatgtaatgat agcagtgaaaatgctgaaagaggacgccactgaggatctacagttagactttgagcgggaagcgtccttaatggcggatt ttgaacatccaaatattgtaaaacttgttgggatttgtgcaattggtaaaccaatgtgtctgttatttgaattcatgaac aaaggtgatttgaatgaattcttaagactaaacagttcagaaaattacataatcagaagacatagtattgacatttattc agagaggatacccaccataacaaccaaagatcagctatttatggcgcttcaagtcgcgtgtgggatggtgtatctctcag aacgaggctttgttcacagggatttggccacgcgcaactgtctcgttggtgatgctttaactgtgaaaatagctgacttt ggtctagcaagaagtgttcattctttagattattaccgagggagtgagcacgatgctatacctatacgctggatgccacc agagtccatactctataacaagtttacagtagaatcagacgtttggtcgtttggtgtactgttgtgggagattttctcct tcgcgttacagccgtattacggactgacacacgaagaagtcgtacagtttatcaaagacggtaaagtcctggcttgtcca gagaaaacacccaaacaaatatatgatctgatgaaactgtgctggagccgtaaaccttcccatcgtccgtgcttccagat gttacataaaactcttgtctccatacacagcgactatccaaaacacaggatcatgagtgaagctgtattatag |
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Protein
| Protein ID | pfu_aug2.0_1167.1_24742.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1167.1_24742.t1 MIILKGFLDLEFHFTRQPKNATVLEDSRYALHCMARGEGACRRKVNVKVKWFKDGVRIPKKGPNYRTIRTSGTLRFNNIK ITDRGEYYCKAVCKRHRLTSNEATIQVEAKAKFTEMHPHDRNIVTGSPIQLKCIVAGIPTPQIEWHQENFTLSEGEVPGV KIQTNNDSSHIVRSILYIPRVDHNVTFTCLAFNTPLGKKEVIERRAKVVVLPKPESSNSSTPKGPFGICAPYNGSICSKI LGQRVVYYNTSYSNPAQEQEIMVRHLLDRINSATIMESHCGVPALKIFCHQAYPGCEEVKGQNDYNVKIKPLCRESCLAV KDLLCFNQWIEVANRINLRNPAHHYHLPDCAALPSKTDNDTQCTDANLFYRDASLVSNDCYKGTGQWYNGMVNVTRSGLT CQAWASQTPHVHNRPPGVFPSLEGAENYCRNPGSEEDRPWCYTTHSLTRWDFCEIKPCATAVNPVMQEPVEKSVGVIAKV IIAVVSIVGVFVVALIACLCYQIIKQRRNVRYNTTPQDDIDIDIDKLPTNISYHRVTDSTKMNPKLECLEYPRNDIVYIR DIGQGAFGRVFKAKAPNLKNKGEDVMIAVKMLKEDATEDLQLDFEREASLMADFEHPNIVKLVGICAIGKPMCLLFEFMN KGDLNEFLRLNSSENYIIRRHSIDIYSERIPTITTKDQLFMALQVACGMVYLSERGFVHRDLATRNCLVGDALTVKIADF GLARSVHSLDYYRGSEHDAIPIRWMPPESILYNKFTVESDVWSFGVLLWEIFSFALQPYYGLTHEEVVQFIKDGKVLACP EKTPKQIYDLMKLCWSRKPSHRPCFQMLHKTLVSIHSDYPKHRIMSEAVL |
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