Gene
| Gene Model ID | pfu_aug2.0_1167.1_24741 |
|---|---|
| Locus | scaffold1167.1 : 121526 ... 124872 : + |
| To GenomeBrowser | scaffold1167.1:121526..124872 |
| Genes list of scaffold | scaffold1167.1 |
| Synonym | pfu_aug1.0_3076.1_08521 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1167.1_24741.t1 | 1 | 1 | DUF2372 | 39 | 121 | 3.3e-21 | 75.1 | 3.2e-25 | 4.8e-21 | 74.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1167.1_24741.t1 | gi|524884678|ref|XP_005098958.1| | PREDICTED: proteasome assembly chaperone 3-like isoform X2 [Aplysia californica] | 3.0e-31 |
| pfu_aug2.0_1167.1_24741.t1 | gi|524884676|ref|XP_005098957.1| | PREDICTED: proteasome assembly chaperone 3-like isoform X1 [Aplysia californica] | 2.0e-30 |
| pfu_aug2.0_1167.1_24741.t1 | gi|657546951|ref|XP_008278589.1| | PREDICTED: proteasome assembly chaperone 3 [Stegastes partitus] | 8.0e-24 |
| pfu_aug2.0_1167.1_24741.t1 | gi|260806585|ref|XP_002598164.1| | hypothetical protein BRAFLDRAFT_123313 [Branchiostoma floridae] | 9.0e-24 |
| pfu_aug2.0_1167.1_24741.t1 | gi|736183380|ref|XP_010769341.1| | PREDICTED: proteasome assembly chaperone 3 [Notothenia coriiceps] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1167.1_24741.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1167.1_24741.t1 atgaataacgttcaacaaaacacagattcacccttgaaaacaaaacaaattacagtctgtgtagaaggatacaacacaaa cctcctttgcagccatttcgaggatagacttttcatcattgtcacacagtacaacaaaattggaaccttggtggaggtga ccagagacgtcgtgttggaggagatgtcggcatcacgaccatcttactcatccagagtccttctgggagttgatgagcct cttacccatgttatagccaagaacctactgtctaaactagattctaccaaaccagttctcctttccatgtcactgaaaga cacgtccccgaagacagtacaggggctaagtgaagctgtgaagggcgtggtgggatag |
|
Protein
| Protein ID | pfu_aug2.0_1167.1_24741.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1167.1_24741.t1 MNNVQQNTDSPLKTKQITVCVEGYNTNLLCSHFEDRLFIIVTQYNKIGTLVEVTRDVVLEEMSASRPSYSSRVLLGVDEP LTHVIAKNLLSKLDSTKPVLLSMSLKDTSPKTVQGLSEAVKGVVG |
|