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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1165.1_18141
Locus scaffold1165.1 : 61396 ... 64319 : +
To GenomeBrowser scaffold1165.1:61396..64319
Genes list of scaffold scaffold1165.1
Synonym pfu_aug1.0_80177.1_56585

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1165.1_18141.t1 1 1 MFS_1 34 253 4.4e-13 48.6 1.5e-16 7.5e-13 47.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1165.1_18141.t1 gi|260802444|ref|XP_002596102.1| hypothetical protein BRAFLDRAFT_66166 [Branchiostoma floridae] 3.0e-31

Transcript
Transcript IDpfu_aug2.0_1165.1_18141.t1
Definition-
>pfu_aug2.0_1165.1_18141.t1
atgggaactaatacgacagagaaagagtttaaagatgttcagaaaggaccgacatctgtacagaaagtcgttaagacatt
ggttctgattggtgcatggatctgtataggacttaatttggaaatcactggaccaacgttaaaggatctcaaactacgcg
ccaacactaactatgaggagatatcccgggccgtttccggtcggagtattggtttctttatcggggcggcgttaggaggt
ttcctagtagacaaattggaccggttccttgacttgatgatagctatatgtttggacctgatggggatcttcgccgtcat
agcaccacacagtccgaatgtggagcttatgtggttcctatttgttatgcagggaacgtttgaaggagtcatcaatattg
ctggacaaaaactcattttggagctgtggcgggagaaggcatcgtctccgatgcacgccctccattttggattcggtata
ggttctttcattgttcctttgatcgccaatccgtttcttgctgttccggattacatcaatttacaaaacactacgaacgc
ctcactgataaaggacataacaactactacacttccggacctcaccacgatagtgtacgtaaaggaatccaggatagagt
ggccgttcctgatcgttggcgtcatagcagtcgccgagtccttgctcttccattattatcagttcttcggcaaagatagc
cggaatcccgaaattataaatgtcgagaagcagtcgaaagcgaagtcattgaaagaaatcatagatccggcgacgtgcgc
aagcgggaatcgtttttacggacttantttgacagtatcacgggtcccccagactacagcagtgttattccgccagatgg
aaagaactcgaaactatagatcacgtagtacattaggaaggaaacagagaaacaagaaacacagatga

Protein
Protein IDpfu_aug2.0_1165.1_18141.t1
Definition-
>pfu_aug2.0_1165.1_18141.t1
MGTNTTEKEFKDVQKGPTSVQKVVKTLVLIGAWICIGLNLEITGPTLKDLKLRANTNYEEISRAVSGRSIGFFIGAALGG
FLVDKLDRFLDLMIAICLDLMGIFAVIAPHSPNVELMWFLFVMQGTFEGVINIAGQKLILELWREKASSPMHALHFGFGI
GSFIVPLIANPFLAVPDYINLQNTTNASLIKDITTTTLPDLTTIVYVKESRIEWPFLIVGVIAVAESLLFHYYQFFGKDS
RNPEIINVEKQSKAKSLKEIIDPATCASGNRFYGLXLTVSRVPQTTAVLFRQMERTRNYRSRSTLGRKQRNKKHR

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