Gene
Gene Model ID | pfu_aug2.0_1142.1_08187 |
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Locus | scaffold1142.1 : 44198 ... 48275 : - |
To GenomeBrowser | scaffold1142.1:44198..48275 |
Genes list of scaffold | scaffold1142.1 |
Synonym | pfu_aug1.0_3273.1_23271 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1142.1_08187.t1 | 2 | 1 | MFS_1 | 33 | 114 | 7.2e-09 | 34.8 | 1.1e-07 | 0.00053 | 18.7 |
pfu_aug2.0_1142.1_08187.t1 | 2 | 2 | MFS_1 | 135 | 264 | 7.2e-09 | 34.8 | 1.8e-07 | 0.0009 | 18.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1142.1_08187.t1 | gi|260816392|ref|XP_002602955.1| | hypothetical protein BRAFLDRAFT_107789 [Branchiostoma floridae] | 2.0e-13 |
pfu_aug2.0_1142.1_08187.t1 | gi|260818392|ref|XP_002604367.1| | hypothetical protein BRAFLDRAFT_85459 [Branchiostoma floridae] | 2.0e-09 |
pfu_aug2.0_1142.1_08187.t1 | gi|260805873|ref|XP_002597810.1| | hypothetical protein BRAFLDRAFT_102838 [Branchiostoma floridae] | 4.0e-09 |
pfu_aug2.0_1142.1_08187.t1 | gi|260802402|ref|XP_002596081.1| | hypothetical protein BRAFLDRAFT_66187 [Branchiostoma floridae] | 1.0e-07 |
pfu_aug2.0_1142.1_08187.t1 | gi|260796569|ref|XP_002593277.1| | hypothetical protein BRAFLDRAFT_83822 [Branchiostoma floridae] | 1.0e-07 |
Transcript
Transcript ID | pfu_aug2.0_1142.1_08187.t1 |
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Definition | - |
>pfu_aug2.0_1142.1_08187.t1 atgaaggtatcaccgtataataggtatgtatcacagtcgacttatgcgaacaataaaaagcctgcgacattcaaagtgat taaaacaacatgtcttgttctaacctacattgcaatgggtttgttcctagaaataactggtccaaccctgcaggatcata aagggagaactcatgtcgattacgaagttattgccagagcagtggcgggaaggagcgcgggcgacttagtcggttcacta attggtgggatcctggtcgataaagctggtcaccatagtgacatgataattggcatttgtctcctttgtgcagcatcagc aacaatatcagtaccatgggctcaacagaatctcaccgctggttctgattgtagttcaactgacggtgcacaaatattca ttacagactcaaaaattgaatatgcctacttaattgctgcgctcccagcagtattgttctctgttgtcttcctactttac cagttcaaactggcaccacattcagccgcaaatggatcagaagaacatgtccagaaaaggccattcaaagaaatcatcaa ccccgccatgtgtgccagtggtgatttatgctttggactgtctatctgcattctcatgttccttcaatttttcagtgttg ttggaggagaacgactcatgagtaaattcattcgcgcttattcggtagatcatattggattttcaaaagacgacggaagt tacgtagacacggtattctgggtagggttttcagtaggtcgtttcgcaggctttgcagttggcctaacgtttacacaggc cttgcggtttacttccaggcctaacgttttcaaatatatagtttgtcgcgttgtcacggctcatggacatagtattccgt atgagtttatttctatcgttaaggatgctgaatag |
Protein
Protein ID | pfu_aug2.0_1142.1_08187.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1142.1_08187.t1 MKVSPYNRYVSQSTYANNKKPATFKVIKTTCLVLTYIAMGLFLEITGPTLQDHKGRTHVDYEVIARAVAGRSAGDLVGSL IGGILVDKAGHHSDMIIGICLLCAASATISVPWAQQNLTAGSDCSSTDGAQIFITDSKIEYAYLIAALPAVLFSVVFLLY QFKLAPHSAANGSEEHVQKRPFKEIINPAMCASGDLCFGLSICILMFLQFFSVVGGERLMSKFIRAYSVDHIGFSKDDGS YVDTVFWVGFSVGRFAGFAVGLTFTQALRFTSRPNVFKYIVCRVVTAHGHSIPYEFISIVKDAE |