Gene
| Gene Model ID | pfu_aug2.0_1120.1_01400 |
|---|---|
| Locus | scaffold1120.1 : 156999 ... 175115 : - |
| To GenomeBrowser | scaffold1120.1:156999..175115 |
| Genes list of scaffold | scaffold1120.1 |
| Synonym | pfu_aug1.0_532.1_65503 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1120.1_01400.t1 | 1 | 1 | VWA | 2101 | 2196 | 1.6e-20 | 73.5 | 1.6e-24 | 2.4e-20 | 72.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1120.1_01400.t1 | gi|695444868|ref|XP_009534080.1| | hypothetical protein PHYSODRAFT_518839 [Phytophthora sojae] | 0.0 |
| pfu_aug2.0_1120.1_01400.t1 | gi|695444901|ref|XP_009534088.1| | hypothetical protein PHYSODRAFT_518414 [Phytophthora sojae] | 0.0 |
| pfu_aug2.0_1120.1_01400.t1 | gi|675206523|ref|XP_008912146.1| | hypothetical protein PPTG_16264 [Phytophthora parasitica INRA-310] | 0.0 |
| pfu_aug2.0_1120.1_01400.t1 | gi|301096199|ref|XP_002897197.1| | thrombospondin-like protein [Phytophthora infestans T30-4] | 0.0 |
| pfu_aug2.0_1120.1_01400.t1 | gi|698817560|ref|XP_009841809.1| | hypothetical protein H257_15396 [Aphanomyces astaci] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1120.1_01400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01400.t1 atgaagtttacattagccctatgcctcctggtggcaggggccacagtacagggctcctacttatcaggattcagtagtta ttacggtaaaggaggaggaagcggtggaggcggaggatcctcctacggttcacgatcatcttactcatcaggatcatcat acggtggttcatcatcctacagcagcaaatcatccagttcttcctcatacagcaaaggtggttcctctagttcctcttat ggtggtagctcaggctcaagtagctcctcaggaggcggttccgcttacggaggaggtggatcttcaagcggaggttcatc cagcggaggttcatcatatggaggaagctcttccagcggcggatcttcttatggaggatcatccagtggaagttcatcca gcggaggttcagcttatggaggaagttcctccagcggcggatcttcctatgggggctcttcaagcggaggttcatctagc ggaggttcagcttatggaggagtttcatcaggcaaaggttcagcatacggaggagctagttcagggtctgcctatggagc tgcatcaagtggtggatcagcctacggaaaatcatctggatcagcctacggtagcgccgagccagagcctgaagcagttg attgtcatgtttcacagtggtcagcctggggagcacccgataattatcacatccgtacaaggagaaggaaaatccttacc aaaccatcaaatgattgccaagtcggaccatggtcaagatggagctctccagatgcagctggatatagtttcaggaagcg tattgtgttactaaaagctgtcaatggaggacgtccatgtccacaacctcttgtccaaaagaaaattgtacgaattgact gtaaagttggaccttggtcttcctggagcggttctggcggagttaaatcccgatccagatcagtcatcacttacccacaa aatggaggatcaccttgcccagaccttcatcaagtacaaaaagtacccgtcgattgctgcgttggtccctggggagattg gggtcagcctgattcaagtggtgccgtaataagaacaagagaggtcacaacataccctctgaatggaggagcagagtgcc cagataccgtacaaagaaggaaagtcaagatcgattgtgtggttggagcttggtcatcatggagttcaccagattccaat ggatactctcagaggagtcgaaacattgtaaccagtccattgaatggtggacgaatctgtccagcaacgcatgaaaatag aaaggttcccattgactgtattgttactaactggctggcctggggacaagctgacagtagcggtacacaggtcagacaga ggtctattgttcgcatgagccaaaatggaggcaaaggatgtccagatcttgcagaaaagaggaaagtgaaaatcaattgc gtcgtatccgcctggggagcttggagtgcaccaaatccaagtggaatggttataagatcacgacacattattcaacatgc aatgaatggtggcaatcaatgtggaccacttactgaaactaaaccagtacctgtaaactgtgtcatgtccgcttggtctg catggactaatatggacgctagcggagtcagcagacgtacacgtgtaattcttgtcctcccaaggaatggtggaagcgaa tgcggaaaactttctgaattgcgcaaaggacctattgattgcgtactcagccaatggtcagcttggagtaatagtgctaa cactggttcagtctccaggactagatttgttgttgttgcaccacaaaatggaggaaaacaatgtgataaacttttggaaa tacgtaaagtgaaagttgactgtgttgttgctccttggtgtgcttggagcaagcccgacgaatccggtaccagctacaga tcaaggcagattgtccgcactgccctcaatggtggaaaagaatgcccacatttgtcagaaaagagaactgttaaaattaa ttgcgttgttagccaatggtccgagtattcagcaccaaattcagctggtattatcatccgaaccagatccatccttcaac acccacagaatggaggaaatcaatgtccacaccttgcagaatctaagaaagtggccgtcgactgtcttgtatgtgcatgg agtaaatggggagaaacagactccgctggctaccaaactagaaccaggaatgtggtcagagtcaatatcaatggtggaaa agactgtcctgccctcagtgaaaggaggaaagtaccaatcgactgtgttgtaagtccatggtccaaatggagcgacccag atcccgccagcggtattgtcacacgtagaaggtccattcttgtacatcctcagaacggtggtaagggatgccctgacctc gtagagagcaacaaagatccaattgactgcaaagtcagtgactggggagaatggggtaatccaagtaatgctggtatacg cgagagaagacgaggtgttattatccatccattcaatggtggcaaggaatgtcctccacttgttcacagacagaaagttc caagagattgtattgtcagccagtggggcgcttggtctaaggccgatggcgaaggcaatgttgtccgttcaagacgagtt gtactcgctccactaaacggtggcaaggattgtccacatctcgctgaaaataaacaagtaccaatcgactgcgttgttag tgcatgggccgcttggggagcaacagctgaaaacggacgcaccaggagagtacgatatgtcgtcattattcctagaaatg gcgggaaagaatgtccaaatctctcagagacaaagaatgtgttgttggattgcattgtcagtccatggggagcatgggga ccactcaatgaaaatggagtcagcatgcgaattagaagtgttctcagactacctcttaatggaggaaaactttgcccacc gcttacagagaaaaagaatgttccaatcaactgtattgtgtgtacctggtccgcctggagtacagcaagtgattctggtg tacaataccgatccagatccatcaaaacacatccaagaaacggaggcacaaactgtccaaatcttcttgagaggagaaag gttgccatcgattgtttggtgagtgaatggggaccattcagtgctccagacgacagtggtgtacagacaagtatcagaac tgttctcagagtacctcgtaatggaggcaaacaatgtccagaactcgtcagaagaaggaaagttccaattaactgcaagg tcagtgactgggcagcatggagcgacgccaacgaaggaggaatcagtgtcagcaccagggaaatcctcatacatccactc aatggcggtgatgaatgccctgatcttgtaaggaagaggaaagtgcccattaactgtgttgtcagtaactgggagaaatg gagctcacctaactctgctggaattgtgattagaatcaggaatatcctgagaaacccactcaatggcggtaaaccatgcc caggacttgtacagaaaaagaaagtaccaattgactgtgttgtcagtgaatggtcagccttcagtaaaccagatgctcag ggaagctctatcagaaagagatatgtcaaacgttacaatctcaacggtggaaaagaatgtcctcatcttattgaagcaaa gaaaggcccagtcaactgtgttgtcagcgcatgggcagcatggggaggacttgatgagtcatgtactacagtcagaagca gaatggtaacacagtatccattcaatggtggagacatctgtccacaccttgtagaaaagaagaaagttgcatgtgattgc gttgtatcagactgggctgcttggagtgtaccaaatgaacgtggatcatcaatcagaatccgatacatcgttaaacaccc aaggaacggtggtaaacaatgtccaaatctgtccgaaagaagaagaggtccaattgactgtaaggtcagcaactggggtc aattcagtgaacctgatgaggctggaaatatcgtccgtaccaggtctgtgctgagattcccacaaaacaatggaaagaac tgccctgatctcgtcgacaaaaagaaagtgccaatcaattgtctggtcagtgattggtcagcttggtctgcgcctggtaa tgttggacagagtgcccgaagcagaattgtcctcagacacccactcaacggaggcaaagaatgtccaccactcgtcgaga aaaagaagattcctgtcgactgtgttgttggtccatggggagcttggagccaggctgatgaggctggtggtagcactaga acaaggatgattgttattacaccacttaacggaggaaacgcatgtcctaaactgtcagaaaagaaaatagtaccaattga ctgccaagtagcaccttggggagcatggagtgcaccaaatgagaatggtggtcagaagagaatccgttatgtgcttatcc atccaagaaacaaaggaaaactctgtccaccactgtccgagagaagacgagtaccaattaactgcaaggttagcagctgg tctgtatggtcagatagcaatgctgccggtcagagttctaggttcaggactgtccttatcatgccaatgaatggaggaag agaatgtccagatcttgtcgagaaacgaattggcgccattgactgtgttgttagtccatggacagaatggggagctgtag atggaagtggtacaatcaggcgaacaagacatatcatgaccatgccaagaaataacggaaaggaatgtccaggtctctca gaattcagaaaagtaccacgtgactgcattgtcggagcatggggagcatggagtcagactgatgaaagcggatctcaagt caggactagaaatgtcgtcacctacccacttaacaatggcaaacaatgtcccaaactctcacagaagagaaagattaaaa tcgactgtgtcgttagtccttggggaccatggagcgcaaccgacaatgttggcaggagcaaacgaattcgttttgtcgtc agatatccacaaaatggtggcgatagatgtccaccattatctgagggcaggcaaatgaagagggattgtactgttggccc atggggaccatggagcaatgctgatgaagtcggtggcagagttaggaccaggagtgtcgtattccatgccattaatggtg gcaaagaatgtcctaacctctatgaaactgacaaagttcccgttgactgtagagtctccccctggacagaatggaccaca gctgatggtcaaggcatcagcaggaggggaagatatgtcatccaataccaactcaacaatggaaagaaatgtccaaatct caaagaaatcagacgagtcaacattgattgccgtgtgtccggatggtcaccatggaccggtgccgaccttaacggagaca gcttccgattcagatccatcctcatcaggccagtcaacgatggcaaatcatgcccaggactcaaagaacgaaggaaggta ccaatcgactgtgttgtcagcccatggggatcttggtcagcacctgatcctacaggcaagagcatcagaattagatatgt tgtccgtcatccactgaatggaggcaaggactgcccaaaactggaccaggagaaaactgtaccaattgcatgtagagtaa gcggctgggcatcttggagtgaaccagacgagggtggtaacgtagagagagaacgtaccatcattagacatccaaggaac ggtggagacgcctgtccaggtcttaaagaaaataagaaagtacctattgattgcgtgcttggaccttggtcagtatggtc ggaatctggcgagtacggctttgtagccagtgagagaagggttaaaagacatgctctgaacggcggaaaggaatgtgaac gtacttctcgcagaaagagagtgactatcgactgtgtattgggaccatggtcagaatggggtagtccaaataacaacgga agagcaaggaggtcaaggcagatcatcaggaaaccaatccatggaggaaagatttgtggcgatattgacgaatccaagat tgttgtaatcgactgtcaagtgagccagtggggatcctggagtgagccattcggatttggtgatgtctacagacgtagaa agatcctgagacgtcccggacctgacggagaaagctgccctatcctaactgaggctagacaaggacctacacccacaccc aagcaaacagctgaacatttcgccatcagttttgtcaagaggctgattgatactcgcagagacatcgccattgttattga cggttcaggcagtatcggtaacggaccattcgcacaggctctcagagatatatccactctcatcggacagttcagtaact tccaatctcacagattcgcagttatccagtacgccactgttgtggagacagtcttcaacttgaacacacataccactgta tcctccatgcagaacgatatcagaaacatcaaatacatggctggaaacacatgtacaggagatgcatttgaatatgttag gaagaacatcttcacacgtgctaatggtatgtatnnnnnnnnaggatctagtgtacatgtagcagttccagaggcagaag cagaatcaagctacagttctagtcatagttcatcaagtcacagttcatccagttcaggtggcggacattcagtggcagaa ttccaccatgtattcagtgagcccgtataccatccaccagctaagagctacccaccaagctcgggaggcggttacatggg ataa |
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Protein
| Protein ID | pfu_aug2.0_1120.1_01400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01400.t1 MKFTLALCLLVAGATVQGSYLSGFSSYYGKGGGSGGGGGSSYGSRSSYSSGSSYGGSSSYSSKSSSSSSYSKGGSSSSSY GGSSGSSSSSGGGSAYGGGGSSSGGSSSGGSSYGGSSSSGGSSYGGSSSGSSSSGGSAYGGSSSSGGSSYGGSSSGGSSS GGSAYGGVSSGKGSAYGGASSGSAYGAASSGGSAYGKSSGSAYGSAEPEPEAVDCHVSQWSAWGAPDNYHIRTRRRKILT KPSNDCQVGPWSRWSSPDAAGYSFRKRIVLLKAVNGGRPCPQPLVQKKIVRIDCKVGPWSSWSGSGGVKSRSRSVITYPQ NGGSPCPDLHQVQKVPVDCCVGPWGDWGQPDSSGAVIRTREVTTYPLNGGAECPDTVQRRKVKIDCVVGAWSSWSSPDSN GYSQRSRNIVTSPLNGGRICPATHENRKVPIDCIVTNWLAWGQADSSGTQVRQRSIVRMSQNGGKGCPDLAEKRKVKINC VVSAWGAWSAPNPSGMVIRSRHIIQHAMNGGNQCGPLTETKPVPVNCVMSAWSAWTNMDASGVSRRTRVILVLPRNGGSE CGKLSELRKGPIDCVLSQWSAWSNSANTGSVSRTRFVVVAPQNGGKQCDKLLEIRKVKVDCVVAPWCAWSKPDESGTSYR SRQIVRTALNGGKECPHLSEKRTVKINCVVSQWSEYSAPNSAGIIIRTRSILQHPQNGGNQCPHLAESKKVAVDCLVCAW SKWGETDSAGYQTRTRNVVRVNINGGKDCPALSERRKVPIDCVVSPWSKWSDPDPASGIVTRRRSILVHPQNGGKGCPDL VESNKDPIDCKVSDWGEWGNPSNAGIRERRRGVIIHPFNGGKECPPLVHRQKVPRDCIVSQWGAWSKADGEGNVVRSRRV VLAPLNGGKDCPHLAENKQVPIDCVVSAWAAWGATAENGRTRRVRYVVIIPRNGGKECPNLSETKNVLLDCIVSPWGAWG PLNENGVSMRIRSVLRLPLNGGKLCPPLTEKKNVPINCIVCTWSAWSTASDSGVQYRSRSIKTHPRNGGTNCPNLLERRK VAIDCLVSEWGPFSAPDDSGVQTSIRTVLRVPRNGGKQCPELVRRRKVPINCKVSDWAAWSDANEGGISVSTREILIHPL NGGDECPDLVRKRKVPINCVVSNWEKWSSPNSAGIVIRIRNILRNPLNGGKPCPGLVQKKKVPIDCVVSEWSAFSKPDAQ GSSIRKRYVKRYNLNGGKECPHLIEAKKGPVNCVVSAWAAWGGLDESCTTVRSRMVTQYPFNGGDICPHLVEKKKVACDC VVSDWAAWSVPNERGSSIRIRYIVKHPRNGGKQCPNLSERRRGPIDCKVSNWGQFSEPDEAGNIVRTRSVLRFPQNNGKN CPDLVDKKKVPINCLVSDWSAWSAPGNVGQSARSRIVLRHPLNGGKECPPLVEKKKIPVDCVVGPWGAWSQADEAGGSTR TRMIVITPLNGGNACPKLSEKKIVPIDCQVAPWGAWSAPNENGGQKRIRYVLIHPRNKGKLCPPLSERRRVPINCKVSSW SVWSDSNAAGQSSRFRTVLIMPMNGGRECPDLVEKRIGAIDCVVSPWTEWGAVDGSGTIRRTRHIMTMPRNNGKECPGLS EFRKVPRDCIVGAWGAWSQTDESGSQVRTRNVVTYPLNNGKQCPKLSQKRKIKIDCVVSPWGPWSATDNVGRSKRIRFVV RYPQNGGDRCPPLSEGRQMKRDCTVGPWGPWSNADEVGGRVRTRSVVFHAINGGKECPNLYETDKVPVDCRVSPWTEWTT ADGQGISRRGRYVIQYQLNNGKKCPNLKEIRRVNIDCRVSGWSPWTGADLNGDSFRFRSILIRPVNDGKSCPGLKERRKV PIDCVVSPWGSWSAPDPTGKSIRIRYVVRHPLNGGKDCPKLDQEKTVPIACRVSGWASWSEPDEGGNVERERTIIRHPRN GGDACPGLKENKKVPIDCVLGPWSVWSESGEYGFVASERRVKRHALNGGKECERTSRRKRVTIDCVLGPWSEWGSPNNNG RARRSRQIIRKPIHGGKICGDIDESKIVVIDCQVSQWGSWSEPFGFGDVYRRRKILRRPGPDGESCPILTEARQGPTPTP KQTAEHFAISFVKRLIDTRRDIAIVIDGSGSIGNGPFAQALRDISTLIGQFSNFQSHRFAVIQYATVVETVFNLNTHTTV SSMQNDIRNIKYMAGNTCTGDAFEYVRKNIFTRANGMYXXXGSSVHVAVPEAEAESSYSSSHSSSSHSSSSSGGGHSVAE FHHVFSEPVYHPPAKSYPPSSGGGYMG |
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