Gene
| Gene Model ID | pfu_aug2.0_1120.1_01399 |
|---|---|
| Locus | scaffold1120.1 : 146260 ... 151955 : - |
| To GenomeBrowser | scaffold1120.1:146260..151955 |
| Genes list of scaffold | scaffold1120.1 |
| Synonym | pfu_aug1.0_532.1_65502 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1120.1_01399.t1 | 1 | 1 | VWA | 55 | 187 | 2.7e-08 | 33.7 | 1.1e-11 | 5.2e-08 | 32.8 |
| pfu_aug2.0_1120.1_01399.t1 | 4 | 1 | TSP_1 | 220 | 270 | 5.7e-33 | 112.7 | 2.5e-14 | 1.3e-10 | 41.2 |
| pfu_aug2.0_1120.1_01399.t1 | 4 | 2 | TSP_1 | 277 | 325 | 5.7e-33 | 112.7 | 2.6e-11 | 1.3e-07 | 31.6 |
| pfu_aug2.0_1120.1_01399.t1 | 4 | 3 | TSP_1 | 333 | 377 | 5.7e-33 | 112.7 | 1.2e-06 | 0.0059 | 16.6 |
| pfu_aug2.0_1120.1_01399.t1 | 4 | 4 | TSP_1 | 391 | 437 | 5.7e-33 | 112.7 | 1.5e-14 | 7.5e-11 | 41.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1120.1_01399.t1 | gi|395530980|ref|XP_003767562.1| | PREDICTED: hemicentin-1 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_1120.1_01399.t1 | gi|513002792|ref|XP_004862889.1| | 0.0 | |
| pfu_aug2.0_1120.1_01399.t1 | gi|126306532|ref|XP_001375841.1| | PREDICTED: hemicentin-1 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_1120.1_01399.t1 | gi|512932467|ref|XP_004907178.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1120.1_01399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01399.t1 atgaatgtttccttgggtaaaatatggcgtacgatgttcttttacatgagccttatcacgttacacgtcaaatgtaatgg ccgctgtagtaaaactgtagacttaattgtactagttgaatcatccaataaaactgccttctctcatggcgagacacaaa catggcacccggccatctcactcttcctggatggtttattccactctctggacatcggagaaaatggcttccgtgtagcc gtcatcctgtatagtacgtcaattgatgacgtcatgacatttgctgtcgatagacagtttgctcatcatggaatttcgta tctacggcccaaatatggaagtgctaatttgcatattggtctggcagaaatgaacaggataattagatattattcccgcc ctggtgtaaccagacgagccgtgatcgtcagcgggtctcatttcctgtatcccaccgatattctctctgaagtgtggcgt tctaagatgttgaatatagatatggccgccatcggctttggggcagaggccaatgaaaacgaaatcagacaaatcgccgg tgacttcgtgattactatagatgatatagggatgttgtatgccctagtaaagagagtgaccgacaggctgtgcatagaac ccattgatggtcaatggtcgcattggttacaatggacatcgtgctcagcttcatgtgagggcggctacagaacgcgcatg cgcgaatgcaataatccagagcccaagtacggcggaaagaactgtagaggatcaaattcagatacatttatctgtaatat gggaccttgcaatgttgaatttcctcagtctgagtggtccagctggggagattgttcaagttcttgcgggaagggacagg aagtgaggtcacgaatttgttcatccaccaatcatgtgcactgtaacaacctgggtattgaaacagatgtacgtgaatgc accaaagcaccttgtccacacccagagggagtttggtctgaatggtcacagtggtccacatgtgactgtaaatctcaaac agctaatcgaacgcgcacctgcaagtcccaaagtccggggaatggtagacaagactgtcagggattcagtcgtgctgtta tagcttgtgattccagtatgaaccctgagtgtcctgtggatgggcattggtcagattggtcatcgtggagcacttgttcc gtaacatgtggaaccggaagtagacggcggaacaggaaatgtgacaactcagtaccggagaatggcggaaaagactgtaa cggagttaaaactgaaattttagattgcgactctcttgttatttgcaatgaatgcatggctctaacgtcagacattggcc cgcaatggtacgacctacatatttttggagcctggattccacaaagatgtcaaggaaaccaaattttctctcagtctttg tgtgactgtgtacgtcctaggcacgatgcttccttgttcagagactgccgtttgatgtttcatctaaattttcatacttc tccggaggaagacgagatgaattctcactcacgttaccatatgagagggaccatctttgactccgtcgattataatatcc atggtgacggcgtattcagacaaaattccagagttattctttggcaatttcacgacattgactggaaattcaatgtggat atttttatgcgtgttaaaccggaagtaaatctatcgccatcaccggtgacattactaactgacggcgactgttctacgtt agatgtcagtccgtcattacttatagctttagattatcgtttgaatccaaatacagttactgttatgtttggactttcgt tagaggatagacataatatgttatacataaatatttcaacaaaggttgacgatttcattgatatacacttaacatacaaa ggcacaaatttcggaggagttgtaaatggaaggaaatctgaaattaacttcgaaaagccagcgaccgtcaagagacaccc tggaccgttgacaataggaaaaagcatgtgtgcattagacaacccaggcttctccgggcttataaaagaggtcgatttct tcaagtgctag |
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Protein
| Protein ID | pfu_aug2.0_1120.1_01399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01399.t1 MNVSLGKIWRTMFFYMSLITLHVKCNGRCSKTVDLIVLVESSNKTAFSHGETQTWHPAISLFLDGLFHSLDIGENGFRVA VILYSTSIDDVMTFAVDRQFAHHGISYLRPKYGSANLHIGLAEMNRIIRYYSRPGVTRRAVIVSGSHFLYPTDILSEVWR SKMLNIDMAAIGFGAEANENEIRQIAGDFVITIDDIGMLYALVKRVTDRLCIEPIDGQWSHWLQWTSCSASCEGGYRTRM RECNNPEPKYGGKNCRGSNSDTFICNMGPCNVEFPQSEWSSWGDCSSSCGKGQEVRSRICSSTNHVHCNNLGIETDVREC TKAPCPHPEGVWSEWSQWSTCDCKSQTANRTRTCKSQSPGNGRQDCQGFSRAVIACDSSMNPECPVDGHWSDWSSWSTCS VTCGTGSRRRNRKCDNSVPENGGKDCNGVKTEILDCDSLVICNECMALTSDIGPQWYDLHIFGAWIPQRCQGNQIFSQSL CDCVRPRHDASLFRDCRLMFHLNFHTSPEEDEMNSHSRYHMRGTIFDSVDYNIHGDGVFRQNSRVILWQFHDIDWKFNVD IFMRVKPEVNLSPSPVTLLTDGDCSTLDVSPSLLIALDYRLNPNTVTVMFGLSLEDRHNMLYINISTKVDDFIDIHLTYK GTNFGGVVNGRKSEINFEKPATVKRHPGPLTIGKSMCALDNPGFSGLIKEVDFFKC |
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