Gene
| Gene Model ID | pfu_aug2.0_1120.1_01393 |
|---|---|
| Locus | scaffold1120.1 : 1 ... 42505 : - |
| To GenomeBrowser | scaffold1120.1:1..42505 |
| Genes list of scaffold | scaffold1120.1 |
| Synonym | pfu_aug1.0_21388.1_62086 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1120.1_01393.t1 | 2 | 1 | Astacin | 97 | 292 | 0.0 | 280.7 | 8.40779e-45 | 1.29998e-41 | 142.0 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 1 | EGF | 403 | 431 | 4.1e-28 | 96.9 | 5.3e-11 | 7.9e-08 | 32.1 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 1 | EGF_2 | 403 | 434 | 3.3e-09 | 36.7 | 2.0e-05 | 0.029 | 14.5 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 2 | EGF | 441 | 473 | 4.1e-28 | 96.9 | 4.3e-09 | 6.3e-06 | 26.0 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 2 | EGF_2 | 441 | 474 | 3.3e-09 | 36.7 | 1.5e-05 | 0.022 | 14.9 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 3 | EGF | 479 | 508 | 4.1e-28 | 96.9 | 3.0e-10 | 4.5e-07 | 29.7 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 3 | EGF_2 | 479 | 510 | 3.3e-09 | 36.7 | 5.3e-06 | 0.0078 | 16.3 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 4 | EGF | 515 | 542 | 4.1e-28 | 96.9 | 1.5e-09 | 2.2e-06 | 27.5 |
| pfu_aug2.0_1120.1_01393.t1 | 4 | 4 | EGF_2 | 515 | 546 | 3.3e-09 | 36.7 | 0.00077 | 1.1 | 9.4 |
| pfu_aug2.0_1120.1_01393.t1 | 2 | 2 | Astacin | 854 | 1049 | 0.0 | 280.7 | 4.2039e-45 | 6.30024e-42 | 143.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1120.1_01393.t1 | gi|156351201|ref|XP_001622405.1| | hypothetical protein NEMVEDRAFT_v1g141385 [Nematostella vectensis] | 9.0e-39 |
| pfu_aug2.0_1120.1_01393.t1 | gi|156351203|ref|XP_001622406.1| | hypothetical protein NEMVEDRAFT_v1g141380 [Nematostella vectensis] | 3.0e-36 |
| pfu_aug2.0_1120.1_01393.t1 | gi|585672101|ref|XP_006818169.1| | PREDICTED: neurogenic locus notch homolog protein 2-like, partial [Saccoglossus kowalevskii] | 3.0e-35 |
| pfu_aug2.0_1120.1_01393.t1 | gi|390369733|ref|XP_003731696.1| | 1.0e-34 | |
| pfu_aug2.0_1120.1_01393.t1 | gi|657758723|ref|XP_008314690.1| | PREDICTED: LOW QUALITY PROTEIN: protein jagged-1a-like [Cynoglossus semilaevis] | 4.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_1120.1_01393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01393.t1 atgggagagtttgaacttcccgacggattcgaatatggcagtgaacagtggaaggagcttgaacacaacagtaccggaaa cggtcatgacatcattgagaacggcgacctggacgattggattggacttttcggaagttttgaaataatgaagaatggcg aggtgataaagccattaatagaccagaatagtttgactgttcagaatgcacagaatcacgatcatcaccatggatacgat actagcagtggacaagtcaggaaaaggaatttccgtaatggattaactctttgggaaaatggaataatcccttatgaaat tgacactaacactataactaaggccactgatcatgccatcattagaggggccattgctgaaatgaacaacctgacatgtt tacaaataataccacgtgaccaggcaccaaatctcactcacacatcctttatacgattcacagacgataatgacggttgt gcctcatgggtaggaagggtccaacctacaaaccaagatattggattggacgacgctgaaaactgtgttgagaaaaccac agtattacatgaggtcatgcatgccatcggtatggaccatgaacagcagaggcaggacagagatgattatatacaaatgt tttggaacaatattctgaatggacagaacaaccacaacatgtacaaaacacagacagccgatagaaacgcctatgatgta gagtcaatcatgcaatacggactttattcatttgccatcaacaatacggcaaagacgatgaaattacttgatagcagatt ggaatttctagtagactccgccaaagcactgacgttttatgacgtaaaggacataacagccggctacaactgcactcact gtggaggagtaataacattgagttctggaggaagtcacgtgatagaatccccaaactatcctaataatcacactttggat aaagtctgcgtttggctaattaaggtatatttctacagtatagncagtagccacccaaggagatatagattctctaagga catatctgcctacaaggaattcagactgaccgtatccttccaaggtgatagtaacctgatgatgatgaggtttgacaata gattctctaaggacatatctgcctacaagggattcagactgaccgtatccatccagggagatagtagtacaccagctgct caaccgtgtgacagtaatccctgtaaaaatggcggtacctgtagtaacagtggctcctccttcacgtgccagtgcactgc aggatggagtggaaatacatgtgaacaacaagtacagccttgtgatagttcaccatgtcagaatggaggaacatgttcca acaacgccaatggaaataccttcacatgctcctgtgcaacgggatggtccggaccaacttgtactgtccaaccgtgtgac agttcaccgtgtcagaacgggggaacatgtacaaacagtggcaacacatttacatgtgcatgtactacagggtggtcagg agctacttgtacagtccaaccgtgtgacagttcaccatgtcagaacgggggaacatgtacaaacagtggcaacaccttta catgtgcatgtactacagggtggtcaagagctacttgttcagtttccgcgtccagctcgtcaatatgtaattttgaaaat gctacgccttgtttcctgaacaacggctacacacgtacgcaggcaaatgcaggttccgtgccatcaccatcttcaggctc gcactatataatactagatcaagattctaccgactatgaggtgatactaagcattaatcagacagctgccgggcttaccc aaggtcagcaatactgccttggttataactacactatcggtggtaccaatcagaatgtagatatcgggttagcgtcagac acaagctccaataatatctttcaagatgcgtatgagcagacggcctggacaaaagccacgtacaccttcactgcaagcgc aaataacccgatacaaatgtacatagacgatgtgttgtccatcaataatccaaaattcgcggattacctcagcaaaatct atccttcggggcttgaagtcaaagaaactacagagccatataattcagcatcctatttggacataatgttgttctacgac aggattgatggcaggaatatgccaacacacggaaatttgagggagctatcacattttcttctgaggaagtataagagaat caacggcaacctacacgaagaactgggagagtttgatcttcccgatggattcgaatatggcagtgaacagtggatggagt atgaacacaacagtaccggacacggtcatgacatcattgagaacggcgacctaactcaaaaccctgatttgtttggactt ttcggaagttttgagatatggacgaaagatggcattcaaaagacctacatagatccgagcagtttgtctgtacagaatgc ccagaatcatgaccatcactatagaaacgacgcctacagaagacaagttagaaaaaggaacttcaatagagaagtaactc tctgggaaaatggagttattccttacgaaattgacacaaacactataacaacggctgctcagcaagccattatcagaggg gccattgctgaaatgaacaacctgacatgtttacgaataataccacgtaaccaggcaccaaatctaactcatacatcatt tatacgattcacagacgataatgacggttgttattcttgggtaggaagagaacaacctacaaaccaagatatcggtttgg acgatgatcaagactgtatagagaaaacaacagttctacacgaaataatgcacgccattggtatggaccatgaacatcag agacaggatagagataattttatagaaatgctttggaacaatatcgtgaatgggcagaacaaccacgacatgaagaaaga acagacatttgatagaaatgcttttgatttagaatctatcatgcagtacggactatattcatttgccatcaacagtaatg caaagacgatgagagtacttgatagcagattggagttcctagtagactccgccaaagcactgacgttttatgacgtcaag gacatcacagccggttacagctgtactc |
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Protein
| Protein ID | pfu_aug2.0_1120.1_01393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1120.1_01393.t1 MGEFELPDGFEYGSEQWKELEHNSTGNGHDIIENGDLDDWIGLFGSFEIMKNGEVIKPLIDQNSLTVQNAQNHDHHHGYD TSSGQVRKRNFRNGLTLWENGIIPYEIDTNTITKATDHAIIRGAIAEMNNLTCLQIIPRDQAPNLTHTSFIRFTDDNDGC ASWVGRVQPTNQDIGLDDAENCVEKTTVLHEVMHAIGMDHEQQRQDRDDYIQMFWNNILNGQNNHNMYKTQTADRNAYDV ESIMQYGLYSFAINNTAKTMKLLDSRLEFLVDSAKALTFYDVKDITAGYNCTHCGGVITLSSGGSHVIESPNYPNNHTLD KVCVWLIKVYFYSIXSSHPRRYRFSKDISAYKEFRLTVSFQGDSNLMMMRFDNRFSKDISAYKGFRLTVSIQGDSSTPAA QPCDSNPCKNGGTCSNSGSSFTCQCTAGWSGNTCEQQVQPCDSSPCQNGGTCSNNANGNTFTCSCATGWSGPTCTVQPCD SSPCQNGGTCTNSGNTFTCACTTGWSGATCTVQPCDSSPCQNGGTCTNSGNTFTCACTTGWSRATCSVSASSSSICNFEN ATPCFLNNGYTRTQANAGSVPSPSSGSHYIILDQDSTDYEVILSINQTAAGLTQGQQYCLGYNYTIGGTNQNVDIGLASD TSSNNIFQDAYEQTAWTKATYTFTASANNPIQMYIDDVLSINNPKFADYLSKIYPSGLEVKETTEPYNSASYLDIMLFYD RIDGRNMPTHGNLRELSHFLLRKYKRINGNLHEELGEFDLPDGFEYGSEQWMEYEHNSTGHGHDIIENGDLTQNPDLFGL FGSFEIWTKDGIQKTYIDPSSLSVQNAQNHDHHYRNDAYRRQVRKRNFNREVTLWENGVIPYEIDTNTITTAAQQAIIRG AIAEMNNLTCLRIIPRNQAPNLTHTSFIRFTDDNDGCYSWVGREQPTNQDIGLDDDQDCIEKTTVLHEIMHAIGMDHEHQ RQDRDNFIEMLWNNIVNGQNNHDMKKEQTFDRNAFDLESIMQYGLYSFAINSNAKTMRVLDSRLEFLVDSAKALTFYDVK DITAGYSCT |
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