Gene
| Gene Model ID | pfu_aug2.0_1100.1_01389 |
|---|---|
| Locus | scaffold1100.1 : 165424 ... 189065 : - |
| To GenomeBrowser | scaffold1100.1:165424..189065 |
| Genes list of scaffold | scaffold1100.1 |
| Synonym | pfu_aug1.0_29.1_65191 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| period | GO:0006355 GO:0007617 GO:0009628 GO:0042752 GO:0044707 GO:0044708 GO:0044767 GO:0046983 GO:0048512 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1100.1_01389.t2 | 6 | 1 | Period_C | 16 | 61 | 2.8e-10 | 40.1 | 0.067 | 170.0 | 1.7 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 1 | PAS | 147 | 182 | 2.0e-11 | 43.6 | 0.0045 | 11.0 | 5.8 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 1 | PAS_11 | 149 | 187 | 3.8e-16 | 59.0 | 0.03 | 74.0 | 3.3 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 1 | PAS_3 | 150 | 189 | 2.1e-11 | 43.7 | 0.0097 | 24.0 | 5.1 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 2 | PAS_11 | 298 | 402 | 3.8e-16 | 59.0 | 1.7e-17 | 4.3e-14 | 52.4 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 2 | PAS | 309 | 397 | 2.0e-11 | 43.6 | 4.5e-12 | 1.1e-08 | 34.8 |
| pfu_aug2.0_1100.1_01389.t2 | 2 | 2 | PAS_3 | 313 | 394 | 2.1e-11 | 43.7 | 2.5e-12 | 6.1e-09 | 35.8 |
| pfu_aug2.0_1100.1_01389.t2 | 6 | 2 | Period_C | 530 | 530 | 2.8e-10 | 40.1 | 2.0 | 4900.0 | -3.1 |
| pfu_aug2.0_1100.1_01389.t2 | 6 | 3 | Period_C | 659 | 702 | 2.8e-10 | 40.1 | 0.036 | 89.0 | 2.5 |
| pfu_aug2.0_1100.1_01389.t2 | 6 | 4 | Period_C | 892 | 991 | 2.8e-10 | 40.1 | 1.8e-11 | 4.3e-08 | 32.9 |
| pfu_aug2.0_1100.1_01389.t2 | 6 | 5 | Period_C | 1039 | 1097 | 2.8e-10 | 40.1 | 6.0 | 15000.0 | -9.6 |
| pfu_aug2.0_1100.1_01389.t2 | 6 | 6 | Period_C | 1134 | 1270 | 2.8e-10 | 40.1 | 4.0e-07 | 0.00099 | 18.7 |
Transcript
| Transcript ID | pfu_aug2.0_1100.1_01389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1100.1_01389.t1 atggcggatggattcattgattccaactatggctctttgagtggtatgcagagtagcagtagcagcttcagcatgtctct tagcggaagcgatacggtcgaagaccaaccatccacaagtggatgtagtagtgatatggcacattccaaacaacaaaagg aaagaaggaaggaacgtgtcaagcactatctcaaacaacttaaagccatggttcctccggccatgggaagtcgggggaaa atgggcactttgtcggcactacagcatgtggtggacagtatgaagaaaatacaagaagggaaagaaaagactgcgttgga aaagcaggatgtcttggagaaaagtttgaacgcatcgctatatgaaggggaaggacaacttccgaagcagaccctgaaaa caaaagactgtctgcggataacactgaggtcaagggattttaccgtaatgaatgtgtcgtctaatttaaacaagttactg gggtatccaatgctttcctggaatggcagagatctgatacatttcattcacaagaaagacgtagtgaccgtcaacagtaa tctggcatacgagtcggaaaacgtctgtgctcctaatgagagagaagaggaaaaagaacaagatgacgtcagaaagtatt tctacttcaggatcagacattacaagagtttgcagtcgggattcagcctgatgaaggccgatcagtacacagcgtttcag gcgtcagtcgttctgaaaactcacgattctggcccagattacagtaacctaaatctgaacgtgaatttgaacgaagacga ggataaatgtccgcacaaatacctgattctggaatgtgttcctctgaagtcggcatatggaattgataacctaagcctgg agaggtttactttcatcaccagacacaccctgttctgtagcttcagctacatgcatcacaatgctatccccctgcttgga tatttaccacaggaccttgtgggcatgtctatatttgatttctaccactcagatgaccttgatagtctctacaatacgta caaacaagtggtatctgctaaaggtactccaattaaaggggcaccgattcgtttccgagccagaaacggcagctacgttt atctggagacagagtggtcgagctttgctaatccctggtcgcgcaggctcgagtttatcatcggtcaacataccgtcatc aagagtcccaaaaatagtaacgtgtttgcagacattgtgacgacacctctaccggaacccggcgaaagtgtgcagaaaac tcagcagaagatcagacaactcttgctgaagccaattgttgaacaccaatccgaggatatacccagcagctctcaagatg aaaagacaactcctccaacattttctgttcatcgcagtcgtaaaagaagacgtattcaaatgcaaaacagcgagtcagaa gaagagcttcataaagtagagaagatttcgactacggtagagcagatgagagatgacatcgatagaaagccgcagattgt gtctaacagtgacgtcagtctctcaccatcacagcaactcttccaggacaatgatacatcagttgcctatgaacagctta actacaccaataatattaaaaaattcttactcagccaacctagatcgtactcatcgaaatcggattccaagtcggacaac aaaagtccgttgtcaaacgaggagtcagacgaagtggaattccaggagcctgaggaagtccctgccacagtggatgattt tgaagtggacatctcagtacccaaaccccccagctttggcagtagtactaaggtattactctctgagcaagggcagcgag aggaggtcgcctctagccccgcccatcataatgaggacatcacggaggagcctgaacctctcaaagaaaccctccctatc cccccgccccctctctccatgccaaccataataatgccgccaccccctccggtcatggaaaaagaggatcacccaaaact gattcacctaacacaagaagcgctaatcaaacacacaaggctacaggagaaaatctacgtcagtcaagcgacacacgatc ggaacatcatgatgaagcaccaggatatgacgggcgtcatgacgcacgattcgcagcgtatgaagcggacccacagtccc gactcggacatgtgggtgtccaggggaagtaaggcttacaaacaggaacaaggggacttactccagccgcccttcccact tagcgtccaacagcaggacctcagcttcgagaaaacacaggctttaaaagccgctcactctcttatggacgggagttttc cgggcagtccaatggcaatttacccggccggagttccgtgtagcgtaccgtcagatacttctattaattccacagcgtct gcatctccattgaaacaacccacacagagaacagtggcgagtactatggcagggaagatgcagtggccctactacccaca ggccggagtatccttcatcccccaagtgatgggtggattctaccagactcagcagcctgccttcacccaggttatgggac agaccaccctgggccatcccgttacaatgcagggctcctcaatgattcccgtcaccatgctacccagcacacacaccagt attaacacgcgcggaatgaggatcccaacatgtggatattcttatggggcaggttttcagcccttactttctgagaatgg aactaaaatagctacaacttcagacatgtcatcaacggaggaaacaagctcatcttacctgtatctgttagaattagacg aaaataacagtgctacaccagaggatatggagggagtacgtactcagtacggtgctgtgaattcaggcgttagcctcaga aaacgagtcaccgaaccaccatggttacagacggtgcactggacaccgaagcttgccttgttgtacaccgtaccacggag gaagaagcaccgcattcttaaggaggacagggacgctttgtgtaagctgaaatcgtcagatcttgtactggaacagatga ccgcgctgcaggaggaagtgacgagcgaaccaaaatccccggttgtggatgaagagagtgactacctattcccactggaa gagagtgagcttcagaaattaatggaatctgccgacgtttctagtgatcaagatagtagtgaaatgtccgtgtgtagcat ggaaagaagccaggacgatatgttgtcaagtgagataattggactcgaaaacaacaaaagtagcgaaagtaaatcggaaa aaactaacgttgagaattatgacaaaaacgcagcagaaagtgagtcagaaaaattacgagatgaaaaagctatgtcatgt gattctggggatcaggaaagtgtcgaatctccgaaggaaaatattgaatcgtctagtcggaaatctgatggagaagcgtc gtctgttgagtgcgagagtgattattcaaagactagcgatctcactccaagcgaccaaaggagtaatgaagaagcatgta gttctattaaagagtcagatggcagtatgaaggaagtggaaacatcctctaaaaattctgatttttcatcgaacgataat aagtcgtcttcggaatcggagccagaaaataaaaaagtccctgtgtctgccccatatgatgtgttcttcgtaccattacc cgtaaaattttgcaaaaagaacaaaaaaagtgttccgtggttggatgagacagagctcaacagtatggtggaaatggagt attccattacttcggaaactttgcagaatcgtttaaaacacgacaaactgagactgagagatatggcacagccggacttg gtgaagcaacagtttgacgctatggttgaggaactgaatttacaaaaagtttcatctccgaaactgtacggtcggcagga ctctcagaaacaagagttccagggtggtccaggtgctgtgttaggacccgtctcaccgaagcgattatcttcccatcaaa aacatagagaagggcgtcgcaagagtaaaatcgacgagaaacttttcgagggtctgtttattacgatgtttaatgagaaa gaagaattaagttctaaatctgactcgtaccctgacattgaggatgtgtctaattcgctggatgagatagattag |
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| Transcript ID | pfu_aug2.0_1100.1_01389.t2 |
| Definition | - |
>pfu_aug2.0_1100.1_01389.t2 atggcggatggattcattgattccaactatggctctttgagtggtatgcagagtagcagtagcagcttcagcatgtctct tagcggaagcgatacggtcgaagaccaaccatccacaagtggatgtagtagtgatatggcacattccaaacaacaaaagg aaagaaggaaggaacgtgtcaagcactatctcaaacaacttaaagccatggttcctccggccatgggaagtcgggggaaa atgggcactttgtcggcactacagcatgtggtggacagtatgaagaaaatacaagaagggaaagaaaagactgcgttgga aaagcaggatgtcttggagaaaagtttgaacgcatcgctatatgaaggggaaggacaacttccgaagcagaccctgaaaa caaaagactgtctgcggataacactgaggtcaagggattttaccgtaatgaatgtgtcgtctaatttaaacaagttactg gggtatccaatgctttcctggaatggcagagatctgatacatttcattcacaagaaagacgtagtgaccgtcaacagtaa tctggcatacgagtcggaaaacgtctgtgctcctaatgagagagaagaggaaaaagaacaagatgacgtcagaaagtatt tctacttcaggatcagacattacaagagtttgcagtcgggattcagcctgatgaaggccgatcagtacacagcgtttcag gcgtcagtcgttctgaaaactcacgattctggcccagattacagtaacctaaatctgaacgtgaatttgaacgaagacga ggataaatgtccgcacaaatacctgattctggaatgtgttcctctgaagtcggcatatggaattgataacctaagcctgg agaggtttactttcatcaccagacacaccctgttctgtagcttcagctacatgcatcacaatgctatccccctgcttgga tatttaccacaggaccttgtgggcatgtctatatttgatttctaccactcagatgaccttgatagtctctacaatacgta caaacaagtggtatctgctaaaggtactccaattaaaggggcaccgattcgtttccgagccagaaacggcagctacgttt atctggagacagagtggtcgagctttgctaatccctggtcgcgcaggctcgagtttatcatcggtcaacataccgtcatc aagagtcccaaaaatagtaacgtgtttgcagacattgtgacgacacctctaccggaacccggcgaaagtgtgcagaaaac tcagcagaagatcagacaactcttgctgaagccaattgttgaacaccaatccgaggatatacccagcagctctcaagatg aaaagacaactcctccaacattttctggcgagtcagaagaagagcttcataaagtagagaagatttcgactacggtagag cagatgagagatgacatcgatagaaagccgcagattgtgtctaacagtgacgtcagtctctcaccatcacagcaactctt ccaggacaatgatacatcagttgcctatgaacagcttaactacaccaataatattaaaaaattcttactcagccaaccta gatcgtactcatcgaaatcggattccaagtcggacaacaaaagtccgttgtcaaacgaggagtcagacgaagtggaattc caggagcctgaggaagtccctgccacagtggatgattttgaagtggacatctcagtacccaaaccccccagctttggcag tagtactaaggtattactctctgagcaagggcagcgagaggaggtcgcctctagccccgcccatcataatgaggacatca cggaggagcctgaacctctcaaagaaaccctccctatccccccgccccctctctccatgccaaccataataatgccgcca ccccctccggtcatggaaaaagaggatcacccaaaactgattcacctaacacaagaagcgctaatcaaacacacaaggct acaggagaaaatctacgtcagtcaagcgacacacgatcggaacatcatgatgaagcaccaggatatgacgggcgtcatga cgcacgattcgcagcgtatgaagcggacccacagtcccgactcggacatgtgggtgtccaggggaagtaaggcttacaaa caggaacaaggggacttactccagccgcccttcccacttagcgtccaacagcaggacctcagcttcgagaaaacacaggc tttaaaagccgctcactctcttatggacgggagttttccgggcagtccaatggcaatttacccggccggagttccgtgta gcgtaccgtcagatacttctattaattccacagcgtctgcatctccattgaaacaacccacacagagaacagtggcgagt actatggcagggaagatgcagtggccctactacccacaggccggagtatccttcatcccccaagtgatgggtggattcta ccagactcagcagcctgccttcacccaggttatgggacagaccaccctgggccatcccgttacaatgcagggctcctcaa tgattcccgtcaccatgctacccagcacacacaccagtattaacacgcgcggaatgaggatcccaacatgtggatattct tatggggcaggttttcagcccttactttctgagaatggaactaaaatagctacaacttcagacatgtcatcaacggagga aacaagctcatcttacctgtatctgttagaattagacgaaaataacagtgctacaccagaggatatggagggagtacgta ctcagtacggtgctgtgaattcaggcgttagcctcagaaaacgagtcaccgaaccaccatggttacagacggtgcactgg acaccgaagcttgccttgttgtacaccgtaccacggaggaagaagcaccgcattcttaaggaggacagggacgctttgtg taagctgaaatcgtcagatcttgtactggaacagatgaccgcgctgcaggaggaagtgacgagcgaaccaaaatccccgg ttgtggatgaagagagtgactacctattcccactggaagagagtgagcttcagaaattaatggaatctgccgacgtttct agtgatcaagatagtagtgaaatgtccgtgtgtagcatggaaagaagccaggacgatatgttgtcaagtgagataattgg actcgaaaacaacaaaagtagcgaaagtaaatcggaaaaaactaacgttgagaattatgacaaaaacgcagcagaaagtg agtcagaaaaattacgagatgaaaaagctatgtcatgtgattctggggatcaggaaagtgtcgaatctccgaaggaaaat attgaatcgtctagtcggaaatctgatggagaagcgtcgtctgttgagtgcgagagtgattattcaaagactagcgatct cactccaagcgaccaaaggagtaatgaagaagcatgtagttctattaaagagtcagatggcagtatgaaggaagtggaaa catcctctaaaaattctgatttttcatcgaacgataataagtcgtcttcggaatcggagccagaaaataaaaaagtccct gtgtctgccccatatgatgtgttcttcgtaccattacccgtaaaattttgcaaaaagaacaaaaaaagtgttccgtggtt ggatgagacagagctcaacagtatggtggaaatggagtattccattacttcggaaactttgcagaatcgtttaaaacacg acaaactgagactgagagatatggcacagccggacttggtgaagcaacagtttgacgctatggttgaggaactgaattta caaaaagtttcatctccgaaactgtacggtcggcaggactctcagaaacaagagttccagggtggtccaggtgctgtgtt aggacccgtctcaccgaagcgattatcttcccatcaaaaacatagagaagggcgtcgcaagagtaaaatcgacgagaaac ttttcgagggtctgtttattacgatgtttaatgagaaagaagaattaagttctaaatctgactcgtaccctgacattgag gatgtgtctaattcgctggatgagatagattag |
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Protein
| Protein ID | pfu_aug2.0_1100.1_01389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1100.1_01389.t1 MADGFIDSNYGSLSGMQSSSSSFSMSLSGSDTVEDQPSTSGCSSDMAHSKQQKERRKERVKHYLKQLKAMVPPAMGSRGK MGTLSALQHVVDSMKKIQEGKEKTALEKQDVLEKSLNASLYEGEGQLPKQTLKTKDCLRITLRSRDFTVMNVSSNLNKLL GYPMLSWNGRDLIHFIHKKDVVTVNSNLAYESENVCAPNEREEEKEQDDVRKYFYFRIRHYKSLQSGFSLMKADQYTAFQ ASVVLKTHDSGPDYSNLNLNVNLNEDEDKCPHKYLILECVPLKSAYGIDNLSLERFTFITRHTLFCSFSYMHHNAIPLLG YLPQDLVGMSIFDFYHSDDLDSLYNTYKQVVSAKGTPIKGAPIRFRARNGSYVYLETEWSSFANPWSRRLEFIIGQHTVI KSPKNSNVFADIVTTPLPEPGESVQKTQQKIRQLLLKPIVEHQSEDIPSSSQDEKTTPPTFSVHRSRKRRRIQMQNSESE EELHKVEKISTTVEQMRDDIDRKPQIVSNSDVSLSPSQQLFQDNDTSVAYEQLNYTNNIKKFLLSQPRSYSSKSDSKSDN KSPLSNEESDEVEFQEPEEVPATVDDFEVDISVPKPPSFGSSTKVLLSEQGQREEVASSPAHHNEDITEEPEPLKETLPI PPPPLSMPTIIMPPPPPVMEKEDHPKLIHLTQEALIKHTRLQEKIYVSQATHDRNIMMKHQDMTGVMTHDSQRMKRTHSP DSDMWVSRGSKAYKQEQGDLLQPPFPLSVQQQDLSFEKTQALKAAHSLMDGSFPGSPMAIYPAGVPCSVPSDTSINSTAS ASPLKQPTQRTVASTMAGKMQWPYYPQAGVSFIPQVMGGFYQTQQPAFTQVMGQTTLGHPVTMQGSSMIPVTMLPSTHTS INTRGMRIPTCGYSYGAGFQPLLSENGTKIATTSDMSSTEETSSSYLYLLELDENNSATPEDMEGVRTQYGAVNSGVSLR KRVTEPPWLQTVHWTPKLALLYTVPRRKKHRILKEDRDALCKLKSSDLVLEQMTALQEEVTSEPKSPVVDEESDYLFPLE ESELQKLMESADVSSDQDSSEMSVCSMERSQDDMLSSEIIGLENNKSSESKSEKTNVENYDKNAAESESEKLRDEKAMSC DSGDQESVESPKENIESSSRKSDGEASSVECESDYSKTSDLTPSDQRSNEEACSSIKESDGSMKEVETSSKNSDFSSNDN KSSSESEPENKKVPVSAPYDVFFVPLPVKFCKKNKKSVPWLDETELNSMVEMEYSITSETLQNRLKHDKLRLRDMAQPDL VKQQFDAMVEELNLQKVSSPKLYGRQDSQKQEFQGGPGAVLGPVSPKRLSSHQKHREGRRKSKIDEKLFEGLFITMFNEK EELSSKSDSYPDIEDVSNSLDEID |
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| Protein ID | pfu_aug2.0_1100.1_01389.t2 |
| Definition | - |
>pfu_aug2.0_1100.1_01389.t2 MADGFIDSNYGSLSGMQSSSSSFSMSLSGSDTVEDQPSTSGCSSDMAHSKQQKERRKERVKHYLKQLKAMVPPAMGSRGK MGTLSALQHVVDSMKKIQEGKEKTALEKQDVLEKSLNASLYEGEGQLPKQTLKTKDCLRITLRSRDFTVMNVSSNLNKLL GYPMLSWNGRDLIHFIHKKDVVTVNSNLAYESENVCAPNEREEEKEQDDVRKYFYFRIRHYKSLQSGFSLMKADQYTAFQ ASVVLKTHDSGPDYSNLNLNVNLNEDEDKCPHKYLILECVPLKSAYGIDNLSLERFTFITRHTLFCSFSYMHHNAIPLLG YLPQDLVGMSIFDFYHSDDLDSLYNTYKQVVSAKGTPIKGAPIRFRARNGSYVYLETEWSSFANPWSRRLEFIIGQHTVI KSPKNSNVFADIVTTPLPEPGESVQKTQQKIRQLLLKPIVEHQSEDIPSSSQDEKTTPPTFSGESEEELHKVEKISTTVE QMRDDIDRKPQIVSNSDVSLSPSQQLFQDNDTSVAYEQLNYTNNIKKFLLSQPRSYSSKSDSKSDNKSPLSNEESDEVEF QEPEEVPATVDDFEVDISVPKPPSFGSSTKVLLSEQGQREEVASSPAHHNEDITEEPEPLKETLPIPPPPLSMPTIIMPP PPPVMEKEDHPKLIHLTQEALIKHTRLQEKIYVSQATHDRNIMMKHQDMTGVMTHDSQRMKRTHSPDSDMWVSRGSKAYK QEQGDLLQPPFPLSVQQQDLSFEKTQALKAAHSLMDGSFPGSPMAIYPAGVPCSVPSDTSINSTASASPLKQPTQRTVAS TMAGKMQWPYYPQAGVSFIPQVMGGFYQTQQPAFTQVMGQTTLGHPVTMQGSSMIPVTMLPSTHTSINTRGMRIPTCGYS YGAGFQPLLSENGTKIATTSDMSSTEETSSSYLYLLELDENNSATPEDMEGVRTQYGAVNSGVSLRKRVTEPPWLQTVHW TPKLALLYTVPRRKKHRILKEDRDALCKLKSSDLVLEQMTALQEEVTSEPKSPVVDEESDYLFPLEESELQKLMESADVS SDQDSSEMSVCSMERSQDDMLSSEIIGLENNKSSESKSEKTNVENYDKNAAESESEKLRDEKAMSCDSGDQESVESPKEN IESSSRKSDGEASSVECESDYSKTSDLTPSDQRSNEEACSSIKESDGSMKEVETSSKNSDFSSNDNKSSSESEPENKKVP VSAPYDVFFVPLPVKFCKKNKKSVPWLDETELNSMVEMEYSITSETLQNRLKHDKLRLRDMAQPDLVKQQFDAMVEELNL QKVSSPKLYGRQDSQKQEFQGGPGAVLGPVSPKRLSSHQKHREGRRKSKIDEKLFEGLFITMFNEKEELSSKSDSYPDIE DVSNSLDEID |
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