Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1100.1_01387
Locus scaffold1100.1 : 154519 ... 158415 : -
To GenomeBrowser scaffold1100.1:154519..158415
Genes list of scaffold scaffold1100.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1100.1_01387.t1 1 1 Glyco_transf_11 154 351 3.1e-33 115.0 3.2e-37 4.7e-33 114.4

Transcript
Transcript IDpfu_aug2.0_1100.1_01387.t1
Definition-
>pfu_aug2.0_1100.1_01387.t1
atggtaaaaaagtttatgtccaaggcaatgtttcaaaggaacaaacagaaatacaaaactctgttctgtactctggcatg
tattatatcattcgtggccataatgaaatgtttcacggcaaattcaagagaggggctgcatcgagaaaaggaagcttaca
agaaatggcttgtgaaactgtgtaaagagattccagcagattcacctcaggttgcttgtatgaaataccaaggacgattg
ggaaatttgctatatatgtacgcttttcactatgtttattcaattcaaaagaatgtagcaatggttcgtaccggaaattt
tgatcttgacagagtgttcgtattggaggaaggtaaatttttagatgagtcgcaatacaacaacacgttttgtcgttgta
tgaagtttatgcatgatagatttgactgtggttacgacgaaaacataaccagtattagtgatggacaaagcgtttcgttc
attggatattttcaaagttggaagtattggatcgaacacgaacatacaatacgtaacctattcacatttcgacctgatgt
aaaaaattctgctcagcgccaatttcgaagaatattagaaaataaaggatggagcgttgaaagtgatgtatttgtcggga
ttcatatacgacgtggagactatgcgaagcaatacttgatagactttggacagaagacggcgccattgacctatatcaat
aaagcagtcgcaattatgaataatattcacaaaatattttcagtcagatatatcgtattttcggataatataaaatggtg
catacgttatgttcggataaaacagaaagacgttttctttgtgcaggacaacacagccgcggtagatatggcaatgatga
ctttgaccaatcactcaataataacagctggtacatttggttggtgggccgcctttctcaccaacggcacaactctatac
tacagagatattttcactagaaatacactttatgcagaacaatttcctaaccaagacacaggcgatttcttcccgcccca
ctggatagggattgattaa

Protein
Protein IDpfu_aug2.0_1100.1_01387.t1
Definition-
>pfu_aug2.0_1100.1_01387.t1
MVKKFMSKAMFQRNKQKYKTLFCTLACIISFVAIMKCFTANSREGLHREKEAYKKWLVKLCKEIPADSPQVACMKYQGRL
GNLLYMYAFHYVYSIQKNVAMVRTGNFDLDRVFVLEEGKFLDESQYNNTFCRCMKFMHDRFDCGYDENITSISDGQSVSF
IGYFQSWKYWIEHEHTIRNLFTFRPDVKNSAQRQFRRILENKGWSVESDVFVGIHIRRGDYAKQYLIDFGQKTAPLTYIN
KAVAIMNNIHKIFSVRYIVFSDNIKWCIRYVRIKQKDVFFVQDNTAAVDMAMMTLTNHSIITAGTFGWWAAFLTNGTTLY
YRDIFTRNTLYAEQFPNQDTGDFFPPHWIGID

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495