Gene
| Gene Model ID | pfu_aug2.0_1080.1_01370 |
|---|---|
| Locus | scaffold1080.1 : 141916 ... 154533 : + |
| To GenomeBrowser | scaffold1080.1:141916..154533 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug1.0_5481.1_02014 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1080.1_01370.t1 | 2 | 1 | Cyclin_N | 399 | 436 | 8.2e-06 | 25.3 | 0.0073 | 54.0 | 3.3 |
| pfu_aug2.0_1080.1_01370.t1 | 2 | 2 | Cyclin_N | 454 | 514 | 8.2e-06 | 25.3 | 1.1e-07 | 0.00079 | 18.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1080.1_01370.t1 | gi|524868213|ref|XP_005090911.1| | PREDICTED: cyclin N-terminal domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1080.1_01370.t1 | gi|260819120|ref|XP_002604885.1| | hypothetical protein BRAFLDRAFT_217110 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1080.1_01370.t1 | gi|585669653|ref|XP_002735714.2| | PREDICTED: cyclin N-terminal domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1080.1_01370.t1 | gi|632986179|ref|XP_007910090.1| | PREDICTED: cyclin N-terminal domain-containing protein 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1080.1_01370.t1 | gi|340377783|ref|XP_003387408.1| | PREDICTED: cyclin N-terminal domain-containing protein 1-like [Amphimedon queenslandica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1080.1_01370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01370.t1 atggcacttgctcgagcatcctctcgttcttcattacgtcttcttgaaaaaagaaacgaaagtaataatgactctaaaga tatatcttctacaacttctgttaaatcctacgccctagataaaggaaaggcacttgcaaagaaagccgatgcctgcgata ggggcactgtacacacatctgcctacgaggtcttccgtagtatactggataccacaattaaagaaagctgcacgaccccc agcattcaattgtgttgtaacatcacttgcgataccgattctacaggcgcagtagtttccattgtataccagctagcgaa taaaaaatcagatggttcagccggcaagcaaactaaatgctctgtgacattatttcatacaacctcttctcttcttgcta atggcagtaaaatatgcacttttgtagacgagatgtttatgcctgctataaagttactttgtgagcgacagtccgagata caagtgagtgatatgactatgaaaggtgagctcttacgtacccagcaatataatgacttgtctaaaagtaatgatgcaaa ctctgagactcataaggttaccttggcctcacttatcccgccttgcacgcgtattggtagtgacacaaatcacagatgcg acagtcatatgtgtgctatatcgagtgactccatatgctctgtaactgagggtcctgataaagactcggtatgtgttgcg tccgttgatcatgatccaaatacttttttatgcccagtatgtatgttagaagcgaaacttgatactatccattgcgaaag ctgccttcaatggtaccactatcggtgtgtgaatcttacatccaaagatgttgagaaaattccagcaaatgcaccctata actgtcctccctgctgtgttgtagcaattggtctagtcgacgaggatagcgcagacccgataaagatagtgcctgatcca aaaccaactaacctttcgcagagtgggtcagtatatactgctcgcacgcctactagtgcaacttctactttaactacggt taccaccagtcatagtactagtcaagtaatatcatccaaagtgaacaccacaacgtgccccttaccgatacataatgaaa atatcatggtgaatgacagtagcattatctcacccatgggaatatttagagctggatgtcccactgagattatattttta acgtgcgagaagttgaaaacagcacctgatgcaaaatacgctgctgctgaaatttttgacagcttcatgttcaaacatat agaagatctacgtaagcatgtacagaaatcagccagccatcagaagaagaaagactgggaagctatcatgggtcgggtga agaaccagattgcactgagagtggtatcatgttgtcagatagccagcaaactcacttctcattacaaggttgtctctgtt gcaagagccaagaagtatttattagagcttggtcataggtatgcctccgagtccatattacagtcagagatcaggatact caaaactctggacttcaacgtctcaccagcatccacactagtctacgtggagaccattctagaagtgctgggtcataact gtcctgggatagaggtgaagatgtaccatggtgtggctttgcgtgtccttgaccttgtgtatctaaaatataaccaagtg tacagtgtcctgttccaagtcacagtgaggaaagaaaagccatctgataaagaaaaacaagcctttaagaatgttagatc agacaagcttttattggcggtatctgtgatagcgtgtgtagtacatatagcagaacaacataatactgtcaagatagtag aacagctcagccagataacccagattccaagtgacgatatcgtagatttggcctccgttattatacaacaacttaacagt gatgagaataacagtagttctgccataagcaagccaacgtaa |
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Protein
| Protein ID | pfu_aug2.0_1080.1_01370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01370.t1 MALARASSRSSLRLLEKRNESNNDSKDISSTTSVKSYALDKGKALAKKADACDRGTVHTSAYEVFRSILDTTIKESCTTP SIQLCCNITCDTDSTGAVVSIVYQLANKKSDGSAGKQTKCSVTLFHTTSSLLANGSKICTFVDEMFMPAIKLLCERQSEI QVSDMTMKGELLRTQQYNDLSKSNDANSETHKVTLASLIPPCTRIGSDTNHRCDSHMCAISSDSICSVTEGPDKDSVCVA SVDHDPNTFLCPVCMLEAKLDTIHCESCLQWYHYRCVNLTSKDVEKIPANAPYNCPPCCVVAIGLVDEDSADPIKIVPDP KPTNLSQSGSVYTARTPTSATSTLTTVTTSHSTSQVISSKVNTTTCPLPIHNENIMVNDSSIISPMGIFRAGCPTEIIFL TCEKLKTAPDAKYAAAEIFDSFMFKHIEDLRKHVQKSASHQKKKDWEAIMGRVKNQIALRVVSCCQIASKLTSHYKVVSV ARAKKYLLELGHRYASESILQSEIRILKTLDFNVSPASTLVYVETILEVLGHNCPGIEVKMYHGVALRVLDLVYLKYNQV YSVLFQVTVRKEKPSDKEKQAFKNVRSDKLLLAVSVIACVVHIAEQHNTVKIVEQLSQITQIPSDDIVDLASVIIQQLNS DENNSSSAISKPT |
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