Gene
| Gene Model ID | pfu_aug2.0_1075.1_18074 |
|---|---|
| Locus | scaffold1075.1 : 133425 ... 181215 : - |
| To GenomeBrowser | scaffold1075.1:133425..181215 |
| Genes list of scaffold | scaffold1075.1 |
| Synonym | pfu_aug1.0_6711.1_02293 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1075.1_18074.t1 | 6 | 1 | WD40 | 278 | 305 | 4.9e-07 | 29.3 | 0.6 | 1800.0 | -1.0 |
| pfu_aug2.0_1075.1_18074.t1 | 6 | 2 | WD40 | 363 | 404 | 4.9e-07 | 29.3 | 0.41 | 1200.0 | -0.5 |
| pfu_aug2.0_1075.1_18074.t1 | 6 | 3 | WD40 | 437 | 478 | 4.9e-07 | 29.3 | 0.41 | 1200.0 | -0.5 |
| pfu_aug2.0_1075.1_18074.t1 | 1 | 1 | Laminin_G_3 | 561 | 691 | 7.8e-07 | 29.4 | 4.8e-10 | 1.4e-06 | 28.5 |
| pfu_aug2.0_1075.1_18074.t1 | 1 | 1 | PH_BEACH | 1575 | 1666 | 5.5e-30 | 103.3 | 6.1e-33 | 1.8e-29 | 101.6 |
| pfu_aug2.0_1075.1_18074.t1 | 2 | 1 | Beach | 1692 | 1856 | 0.0 | 431.6 | 0.0 | 0.0 | 230.8 |
| pfu_aug2.0_1075.1_18074.t1 | 2 | 2 | Beach | 1862 | 2020 | 0.0 | 431.6 | 0.0 | 0.0 | 201.0 |
| pfu_aug2.0_1075.1_18074.t1 | 6 | 4 | WD40 | 2080 | 2091 | 4.9e-07 | 29.3 | 2.0 | 6000.0 | -2.6 |
| pfu_aug2.0_1075.1_18074.t1 | 6 | 5 | WD40 | 2124 | 2160 | 4.9e-07 | 29.3 | 0.089 | 260.0 | 1.7 |
| pfu_aug2.0_1075.1_18074.t1 | 6 | 6 | WD40 | 2168 | 2202 | 4.9e-07 | 29.3 | 5.1e-10 | 1.5e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1075.1_18074.t1 | gi|513193793|ref|XP_004942733.1| | PREDICTED: neurobeachin-like 1 isoform X13 [Gallus gallus] | 0.0 |
| pfu_aug2.0_1075.1_18074.t1 | gi|513193788|ref|XP_004942732.1| | PREDICTED: neurobeachin-like 1 isoform X12 [Gallus gallus] | 0.0 |
| pfu_aug2.0_1075.1_18074.t1 | gi|513193776|ref|XP_004942728.1| | PREDICTED: neurobeachin-like 1 isoform X8 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1075.1_18074.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18074.t1 atggatgaatccgacggaatggacgatttgtcatctcaagataatttgtttgagctttggatgctctattcgacaaagaa tgatcagagtaagctggaagaattcatacagagttttgtagcaaagtatcacagcttgatagatgtggacctgaatcatt taaatgaaggattttcagatgagggtccccacatcacgagactgccggacaatatactccgtgttctgtccaatctgttc tgtcagtgccttaccaatatcgcaggaaatgatacggaggcagccatccaactctcgggaaatatactaaagtgccttat tatcatatcaaggtggacggtggataagagcaggatgacgtacaaaccggcagctctgcatgtggaagttgtaccgtttt tctatgattgctgtgcaaacagtggcataccaacagacctgcgtctacgactacttcacatgtttggggccatcatgtgt ggaatgcagcacaacggtcttagagttataactccggcaacactagatgtcctgctgaagatgatatcggacaacgaagt atcgggcccggcaaatgagaccagacaggagttatgggacttgagagagttggtgctgaagtgtattatatgtatggtac acgttatacatgcatcaagtcctgaccaggtcctgatgaactttgacctgacctcagacgacgagcatgaaaaccaagtt caactcacaatgattggtgctatcaacgagatgctatcttgccaggacaggaattccttacaagtgatattggtgacagg tggaacctttgacacatttatctcccttcttcagaaaacttcactaactggtcatgaagctcagagactggccatgtcag tgttaaaggtgatgagtactgtgttatcaggatctgtaaacgctaaggaacgtttctctttgagagttgggtacataaag tttgtagaggcattaaaaagcttagggcagccatccagtgcattactccaagctgtattagatttggttgtggagggaga ttttgacatcagtcaaccccagctgattcagaacacgcaggcggccattatgttgctatgctggttgccggacatccagt cacatgacctacagatctggctagcagagaatctgtgtaaactgtgtatcaagggacataacaagctgagttgctgtaac gacggaatgatcagtgctatattgacggtcctagctagggaaaaacaagttgtggagggagattttgacatcagtcaacc ccagctgattcagaacacgcaggcggccattatgttgctatgctggttgccggacatccagtcacatgacctacagatct ggctagcagagaatctgtgtaaactgtgtatcaagggacataacaagctgagttgctgtaacgacggaatgatcagtgct atattgacggtcctagctagggaaaaacaagtagatcaaaaagctatcgggcatttgatagacttactggaggagttagg tacccaatcaataactgccactgaattaaagaagttgattggtctactgaaaacagaggaaggagaagagcagagtatat actgtagtcgtttgatgcgctgtatgtccaccatggctaggagggagggaaaagactcagcactacagttctttcacctc aaagatcagggagattgcatatcattacctgggtttaggaaatggcccggcggcagcttttccttccatgcttggttacg acttgactgtgatacttgtgccgaagaaaatataactttccccaaccagacatatcgtaggcaattatatagttttgtga gtagtacaggctgtggttttgaggcattctttactcctgattttgaccttgttttatcagtcttcagcaaaaaggagcac tcgtcagccattataacggaaacggaacttggcaatgcacagtggcattccatcgacgtagttcacagcagctctcgtag gccctttgcaaacagtcatctaaatgtttatattgatggaaaattacgtctcagttctcagctcaaatttcccaatatga cagagcctttgacatcctgtaagatcggatctccgtcatctaaagctacgatcagcgccctcatggatcaaaatgcttct gccgcccctgacgtcaaatctaggtcacctttcaagctgttgtttcaacggcagtccggtgcccttgacccggatataac aaccgttcccatgggaacccaggacgatgtttggggtttaccaattacgatgcatggacagctggggtctgtttgtatct ttcacgatgtggtacagcccgggcaggtcaaggcgatgtttaatgcagggccaaatcacacacacctgttcagcagtgat gaattcagtgaactggcagatctgaccggtaaaatggtgttattctaccatgctaaggcgtgtagagatgacctttgtgt cgacctttcacagaatcagaacgacggacggcttattggacagcaatgtgtattatgggatatcaaggatgtcattaatt gtataggaggaatccaagtgttatttcccctactagaacacgtgaacaaggcaccaatgcctcgacaactcagcgaggac tcgactcgtgccatcagcaatatgcacaaaggaatcgagcaagatgattggatagttgtaccaagcagttcttatgcaga ttccaagttagagcagaaccctgtcgcaggatttctcacattactacgtcacatgctacactcccagttgaccaatcagg agacgtttacacgtactagcggagccgcagttatcagtgctctcttacagaaggtcaaccccaagatgatagatgtgaat gtactaatggccgtccagttattggtggaaaccatagcaaccgtcaaccaaacattactccagcatctttaccagtacat cttgtttgatttccgaatttggagtcagagtgactttcctgtcagaattggacatatccagtacctgtctacaataatca aggacgacagacgctttttcagaaagaagtttggtgttcagtatatactagatgtcattaggacttactacagtgacacg tcagaaggaaatgataacatatcttccgaggacatcaagaccatcaggatctgtgaagcgttggacatcctgatcaactt attggagagtaaaacgcggaacgaccagctttatcttcagatgtttgagccagagatggcggaaatgttctacggcttac tggtgtaccctgggaaatctattgtcttctacgagaaaattgtcaaggttttgtacttactgctgaggacagacagagtg tatgagaaaagtaaagttcgcttacggctcacagaatgcggtcatcttggattaatcgggctgatgatgaattgtgatgt gtccggaccgatggtcaaacgttaccttgacatggtcgctgcagtagatgccacacacagctacaatgcagttttagctg tactacagcttatccattacagtgggtctgatataaaattagaagctagcagacagcttttgtcaattttggtatctcgg ccaggagcagcgaagcagtttgcaaagcaactcggttggcaggaatccattactaagctttttatacaccaggtcaggga aggtcatcttgctaacgaggccgttgccatggaaccgcaggaagaggagtatgtcaccgtgtccgaaagcgacatctgga gggtagatctaccaggggaggatactcctaacaaagttgaacaaaatgaaaatgaggaaaatagtggagaaaaggaatct gatccgcttttaaatcattgtaacatgtgtaatgccatatttgattttcaggagagaggtcaagttttctcctggattga cagaatatgtgaagggcatgttttgatacggtcccctgtagaaatcaagagacgactcttagagatgatgattcactcca gtgcttcagatatcagagaaacagctcaagctttggcagccccaatggagaatgccatggaacttgtacgtctggttcac tgttttatgatcagctttgatggtaccgatacagaactgtacagtgagagggtaacgccacagaagatacattttgaaga gagtgcgttcggagatttagagataaaaaaccaacagttctgggctgagtgcaaagagttaatgatggtaaacatgcata gaaggaatcgggaaagaggcgactcaaaactcaaatttgagaacatgatcttgaatcttttccaaggaaaagtacagtat gaagagaggagatttcagaatgtaacaatacaaatgcgcaaccaacatttatctgttctcagacagtggcgagccaccaa agcgttcttcaccggagaaagaggagcgtgggtcagtgggaagaaacagttgatgcacatgaagctatccaatcaggaga attttcaacgaatgaaagtgaaactagtgccgaactataactacgatccccacacggaggccagcatactcagggacaat ctagggatgtgtgaagctacgatggctgcagaaatcgagaagttaaaggtggctaaggaggctgtgatatctaaagacaa cataggagatgacgccctcggtgacgaagaatggaacgtgataagtcaggaagacagaattgacgaggccaaggggaagg agaagttagtactatcagaggaatgtgaccttgtaaccatgatgaatgtggtcaaaggtcgtctggaggtcaccacatct tatgtttacttctttgactgtagccaaaacagagaggaaggaggggaggactttaaatggtcgctgtctcagctgagaga aatccatctccgtcgttataacctacggcgtagtgctatagaagtcttcctggttgatcaaaccaattacttcctcaact tctcacccaaggtgaggaacaaggtgtacagtaagattctgagtctccgaccttcaaatctgatttacttcgggtcaagg tcacccatggaacttctcaaatcctcaggacttacaaagaaatgggtacagagggacatctcaaactttgagtacttgat gcagttaaacactatcgcaggcagaacgtacaatgacctgagtcagtaccctgtgtttccatggatactgtgtgattaca catcagataaccttgaccttgacaatcctgccgtgtaccgtgacctcagtaaacctgtcggagctgtgaaccccaaaaat gaaaaagatatccgagaaaagtataacaactttgaggatccgtcaggagtagttgagaagtttcactacggcacacatta ctcaaactcggcaggtgtgatgcactacatgttgagaatggaaccgtttactagtctacacatccagctacaaagtggaa ggtttgacgtagcggacagacagtttcactctatatctgccacatggcaaagtctgatggaaaaccctaatgatgtcaaa gaacttatcccagaattcttttatctcccagaattccttgtaaatatggctgtttattattacaggtttgacgttgcaga cagacagtttcactctataccagcaacatggcaaagtctgatggaaaaccctaatgatgtcaaagaacttatcccagaat tcttttatctcccagaattccttgtaaatatgaacaattttgaccttggtaaattacaattcactggagaaagaataaac cacgtagagctgccaagatgggccaaatctccggaggattttatttacaagcatcgtcaggccctggagtcggactacgt ctcggctaacctccatcactggattgacttaatatttggatacaaacagaaaggaccagctgctgtagaggccctcaatg tgttctactattgtacttacgaaggggctgtggatttagatgctgtaaaggacgacaacgagaggaaagccttggaggga atgatcaataactttggacaaactccttgtcagctgttgaaggatgcccatccaagaagacatacaatggaagaggtgat attcagatctataaagatggacaaacctctcagtgtgttccagtttgtagatcacatcaaagtcttctatgtcgaggtat ctccagagggggatccattggtgtatgtcagtgtacctttgaatcagtctcgatccatcctaccacaaggaaatgactca ctggttactgtgtccacagatggagtgatcggagtccatggatggctgccctatgataaatccatatcaaactactttac gtttgaaaaggatccatattttgcaaacctgaagtcaagaagaagaattgcatgtgcttttgcaccaggtctaaaaatag atgccaagcttttcgttgttacccatgatgccaaactgctgattagtgtgggacactgggactgctcagttcaagtttac catttaggaaaggcaaagaagatcaatcaactacaaggccacatagatgtggttacgtgtttagccttggattctagcgg cagccatttaatcacagggtcgtctgataccacgtgtataatatggcaggtgtatcaacagctgtcatgtcttttgtaa |
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Protein
| Protein ID | pfu_aug2.0_1075.1_18074.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18074.t1 MDESDGMDDLSSQDNLFELWMLYSTKNDQSKLEEFIQSFVAKYHSLIDVDLNHLNEGFSDEGPHITRLPDNILRVLSNLF CQCLTNIAGNDTEAAIQLSGNILKCLIIISRWTVDKSRMTYKPAALHVEVVPFFYDCCANSGIPTDLRLRLLHMFGAIMC GMQHNGLRVITPATLDVLLKMISDNEVSGPANETRQELWDLRELVLKCIICMVHVIHASSPDQVLMNFDLTSDDEHENQV QLTMIGAINEMLSCQDRNSLQVILVTGGTFDTFISLLQKTSLTGHEAQRLAMSVLKVMSTVLSGSVNAKERFSLRVGYIK FVEALKSLGQPSSALLQAVLDLVVEGDFDISQPQLIQNTQAAIMLLCWLPDIQSHDLQIWLAENLCKLCIKGHNKLSCCN DGMISAILTVLAREKQVVEGDFDISQPQLIQNTQAAIMLLCWLPDIQSHDLQIWLAENLCKLCIKGHNKLSCCNDGMISA ILTVLAREKQVDQKAIGHLIDLLEELGTQSITATELKKLIGLLKTEEGEEQSIYCSRLMRCMSTMARREGKDSALQFFHL KDQGDCISLPGFRKWPGGSFSFHAWLRLDCDTCAEENITFPNQTYRRQLYSFVSSTGCGFEAFFTPDFDLVLSVFSKKEH SSAIITETELGNAQWHSIDVVHSSSRRPFANSHLNVYIDGKLRLSSQLKFPNMTEPLTSCKIGSPSSKATISALMDQNAS AAPDVKSRSPFKLLFQRQSGALDPDITTVPMGTQDDVWGLPITMHGQLGSVCIFHDVVQPGQVKAMFNAGPNHTHLFSSD EFSELADLTGKMVLFYHAKACRDDLCVDLSQNQNDGRLIGQQCVLWDIKDVINCIGGIQVLFPLLEHVNKAPMPRQLSED STRAISNMHKGIEQDDWIVVPSSSYADSKLEQNPVAGFLTLLRHMLHSQLTNQETFTRTSGAAVISALLQKVNPKMIDVN VLMAVQLLVETIATVNQTLLQHLYQYILFDFRIWSQSDFPVRIGHIQYLSTIIKDDRRFFRKKFGVQYILDVIRTYYSDT SEGNDNISSEDIKTIRICEALDILINLLESKTRNDQLYLQMFEPEMAEMFYGLLVYPGKSIVFYEKIVKVLYLLLRTDRV YEKSKVRLRLTECGHLGLIGLMMNCDVSGPMVKRYLDMVAAVDATHSYNAVLAVLQLIHYSGSDIKLEASRQLLSILVSR PGAAKQFAKQLGWQESITKLFIHQVREGHLANEAVAMEPQEEEYVTVSESDIWRVDLPGEDTPNKVEQNENEENSGEKES DPLLNHCNMCNAIFDFQERGQVFSWIDRICEGHVLIRSPVEIKRRLLEMMIHSSASDIRETAQALAAPMENAMELVRLVH CFMISFDGTDTELYSERVTPQKIHFEESAFGDLEIKNQQFWAECKELMMVNMHRRNRERGDSKLKFENMILNLFQGKVQY EERRFQNVTIQMRNQHLSVLRQWRATKAFFTGERGAWVSGKKQLMHMKLSNQENFQRMKVKLVPNYNYDPHTEASILRDN LGMCEATMAAEIEKLKVAKEAVISKDNIGDDALGDEEWNVISQEDRIDEAKGKEKLVLSEECDLVTMMNVVKGRLEVTTS YVYFFDCSQNREEGGEDFKWSLSQLREIHLRRYNLRRSAIEVFLVDQTNYFLNFSPKVRNKVYSKILSLRPSNLIYFGSR SPMELLKSSGLTKKWVQRDISNFEYLMQLNTIAGRTYNDLSQYPVFPWILCDYTSDNLDLDNPAVYRDLSKPVGAVNPKN EKDIREKYNNFEDPSGVVEKFHYGTHYSNSAGVMHYMLRMEPFTSLHIQLQSGRFDVADRQFHSISATWQSLMENPNDVK ELIPEFFYLPEFLVNMAVYYYRFDVADRQFHSIPATWQSLMENPNDVKELIPEFFYLPEFLVNMNNFDLGKLQFTGERIN HVELPRWAKSPEDFIYKHRQALESDYVSANLHHWIDLIFGYKQKGPAAVEALNVFYYCTYEGAVDLDAVKDDNERKALEG MINNFGQTPCQLLKDAHPRRHTMEEVIFRSIKMDKPLSVFQFVDHIKVFYVEVSPEGDPLVYVSVPLNQSRSILPQGNDS LVTVSTDGVIGVHGWLPYDKSISNYFTFEKDPYFANLKSRRRIACAFAPGLKIDAKLFVVTHDAKLLISVGHWDCSVQVY HLGKAKKINQLQGHIDVVTCLALDSSGSHLITGSSDTTCIIWQVYQQLSCLL |
|